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1324 software items. Page 3 of 28. 48 items per page.
97-144 of 1324

Supplementary materials for the article: Towards future pedestrian-vehicle interactions: Introducing theoretically-supported AR prototypes.

Supplementary materials for the article: Towards future pedestrian-vehicle interactions: Introducing theoretically-supported AR prototypes.

  • Augmented Reality
  • Automated vehicles
  • autonomous vehicles
  • + 3
5
39

BlueObelisk Euclid

A library of numeric, geometric and XML routines

  • (HTML)
  • (Java)
1
39

CMLXOM

Java library for working with Chemical Markup Language files.

  • Chemical Markup Language
  • Chemistry
  • XML
  • (Batchfile)
  • (HTML)
  • (Java)
  • + 1
2
39

InstaNovo

InstaNovo is a transformer neural network with the ability to translate fragment ion peaks into the sequence of amino acids that make up the studied peptide(s). InstaNovo+ is a multinomial diffusion model that further improves performance by iterative refinement of predicted sequences.

  • deep learning
  • Machine learning
  • mass spectrometry
  • + 1
  • (Makefile)
  • (Python)
5
39

KNIME molecule viewer nodes

A 3D viewer for large molecules for the KNIME workflow system.

  • Visualization
  • Workflow technologies
  • (CSS)
  • (Java)
  • (JavaScript)
2
39

KNIME ss-TEA node

A node for the KNIME workflow systems that allows you to identify which residue position in a big protein sequence alignment is specific to ligand binding.

  • Workflow technologies
  • (Java)
1
39

sv-callers

Highly portable parallel workflow to detect structural variants in cancer genomes.

  • Big data
  • High performance computing
  • Workflow technologies
  • (Python)
  • (Shell)
4
39

Software accompanying manuscript "Annual Satellite-Based NDVI-Derived Land Cover of Europe for 2001-2019"

Software accompanying manuscript "Annual Satellite-Based NDVI-Derived Land Cover of Europe for 2001-2019"

  • Classification trees
  • CORINE
  • Europe
  • + 3
2
38

simplicial_convolutions

Code underlying: Simplicial Convolutional Filters

  • convolution
  • neural networks
  • simplicial complex
  • (large-text-file)
  • (Markdown)
  • (Matlab)
  • + 1
1
37

Supplementary Materials: When is variable importance estimation in species distribution modelling affected by spatial correlation?

Supplementary Materials: When is variable importance estimation in species distribution modelling affected by spatial correlation?

  • empirical modelling
  • niche models
  • raster
  • + 8
4
37

trip-planning

Code underlying the publication: Dealing with Uncertainty: Understanding the Impact of Prognostic Versus Diagnostic Tasks on Trust and Reliance in Human-AI Decision Making

  • Diagnostic
  • Empirical Studies
  • Human-AI Decision-Making
  • + 6
  • (CSS)
  • (HTML)
  • (JavaScript)
  • + 3
3
37

BIAS

A toolbox for detecting structural bias in continuous optimization heuristics.

  • Bias
  • Metaheuristics
  • optimization
  • + 1
  • (Dockerfile)
  • ("Jupyter Notebook")
  • (Python)
  • + 1
3
37

Code supporting the publication: Can you hear it? backdoor attacks via ultrasonic triggers.

Code supporting the publication: Can you hear it? backdoor attacks via ultrasonic triggers.

  • backdoor attack
  • deep learning
  • Inaudible trigger
  • + 3
  • (Other)
  • (Python)
  • (Shell)
1
36

GSH is a MATLAB package to do Global Spherical Harmonic Analyses (GSHA) and Synthesis (GSHS) for Crust1.0.

GSH is a MATLAB package to do Global Spherical Harmonic Analyses (GSHA) and Synthesis (GSHS) for Crust1.0.

  • Geophysics.
  • gravity
  • Spherical Harmonics Analysis
1
36

IUI2025_ConvXAI

User Interaction Dataset associated with IUI 2025 paper "Is Conversational XAI All You Need? Human-AI Decision Making With a Conversational XAI Assistant"

  • Appropriate Reliance
  • Conversational XAI Interface
  • Human-AI Decision Making
  • ("Jupyter Notebook")
  • (Markdown)
  • (Other)
  • + 1
3
36

talkr

{talkr} is an R package that offers a set of convenience functions for quality control, visualisation and analysis of conversational data. Most notably it provides a range of plotting functions that play well with ggplot and the tidyverse.

  • conversation
  • talk
  • turn-taking
  • + 1
  • (R)
  • (Rez)
4
36

GreenspaceAccessibility (Github) code repository: spatial analysis underlying the journal paper "Measuring children's and adolescents' accessibility to greenspaces from different locations and commuting settings"

GreenspaceAccessibility (Github) code repository: spatial analysis underlying the journal paper "Measuring children's and adolescents' accessibility to greenspaces from different locations and commuting settings"

  • Activity setting
  • Betweenness
  • Exposure
  • + 3
2
35

AHN2 pointcloud viewer

A web application able to visualize the AHN2 point cloud data of the Netherlands.

  • Big data
  • Real time data analysis
  • Visualization
  • (CSS)
  • (Dockerfile)
  • (HTML)
  • + 1
3
35

AHN point cloud viewer web service

A web service to serve large point cloud data efficiently using octrees.

  • Big data
  • Visualization
  • (Java)
  • (Python)
2
34

HyperCanny

Finds edges in high-dimensional data using the Canny algorithm.

  • Data Analysis
  • edge detection
  • High performance computing
  • (C)
  • (C++)
  • (Makefile)
  • + 3
1
34

Code accompanying the paper "Modeling the effect of prior austenite grain size on bainite formation kinetics."

Code accompanying the paper "Modeling the effect of prior austenite grain size on bainite formation kinetics."

  • Bainite
  • Grain size
  • Nucleation
  • + 2
3
33

argopy

Argopy is a python library dedicated to Argo data access, manipulation and visualisation for standard users as well as Argo experts.

  • Data Analysis
  • Data processing
  • Earth and Environmental Sciences
  • + 3
  • (CSS)
  • (Dockerfile)
  • (Python)
  • + 1
2
32

finite-strain-inverse-designed-spinodoids

Data and Code underlying publication: Experiment-informed finite-strain inverse design of spinodal metamaterials

  • In situ characterization
  • Inverse design
  • Machine learning
  • + 2
  • (Matlab)
  • (Other)
  • (Python)
5
31

Numerical and analytical model for Taylor flow in tubular CO2 electrolyser

Numerical and analytical model for Taylor flow in tubular CO2 electrolyser

  • COMSOL
  • gas-liquid Taylor flow
  • MATLAB
  • + 1
4
30

swyft

swyft is the official implementation of Truncated Marginal Neural Ratio Estimation, a hyper-efficient, simulation-based inference technique for complex data and expensive simulators.

  • Bayesian Inference
  • Data Analysis
  • ("Jupyter Notebook")
  • (Python)
5
30

eAC_charging_infra_optimization

Code underlying the publication: Optimizing the battery charging and swapping infrastructure for electric short-haul aircraft—The case of electric flight in Norway

  • Battery swapping systems
  • Commuter air transport
  • Electric aviation
  • + 3
  • (Markdown)
  • (Other)
  • (Python)
1
29

Fit a double logistic function to a Sentinel-2 vegetation index (VI) time series

Fit a double logistic function to a Sentinel-2 vegetation index (VI) time series

  • double logistic function
  • local and global functions
  • Time Series
  • + 1
1
29

Retrieving multi-temporal max/min temperature of target area into a csv file

Retrieving multi-temporal max/min temperature of target area into a csv file

  • csv output
  • grid
  • minimum and maximum temperature
  • + 2
1
29

Inseq

Interpretability for sequence generation models 🐛 🔍

  • deep learning
  • Explainable AI
  • generative models
  • + 2
  • (Dockerfile)
  • (Makefile)
  • (Python)
0
29

Basic code for simulations of reduced Gilad model

Basic code for simulations of reduced Gilad model

  • dynamical systems
  • matlab code
  • pattern formation
  • + 2
1
28

Imitation learning model and datasets: "A Study of Learning Search Approximation in Mixed Integer Branch and Bound: Node Selection in SCIP"

Imitation learning model and datasets: "A Study of Learning Search Approximation in Mixed Integer Branch and Bound: Node Selection in SCIP"

  • branch-and-bound
  • imitation learning
  • MIP
  • + 3
2
28

Code supporting the publication: Going in style: Audio backdoors through stylistic transformations.

Code supporting the publication: Going in style: Audio backdoors through stylistic transformations.

  • backdoor attack
  • deep learning
  • Google Speech Commands
  • + 4
  • (Other)
  • (Python)
  • (Shell)
2
27

AMBER

A real-time pipeline to search for Fast Radio Bursts and other transient radio sources.

  • Big data
  • GPU
  • High performance computing
  • + 1
  • (C++)
  • (CMake)
3
27

OMUSE

A Python environment to interface and couple oceanographic and other earth system model codes.

  • High performance computing
  • Multi-scale & multi model simulations
  • (Batchfile)
  • (C)
  • (C++)
  • + 10
8
27

Data underlying the publication/thesis chapter: FlexConv: Continuous Kernel Convolutions with Differentiable Kernel Sizes

Data underlying the publication/thesis chapter: FlexConv: Continuous Kernel Convolutions with Differentiable Kernel Sizes

  • computer vision
  • Convolutional Neural Network
  • kernel size
  • + 2
  • ("Jupyter Notebook")
  • (Markdown)
  • (Other)
  • + 2
6
26

mpcrl-greenhouse

Software underlying publication: Reinforcement learning-based model predictive control for greenhouse climate control

  • Agriculture
  • Greenhouse climate control
  • Model predictive control
  • + 1
  • (Markdown)
  • (Other)
  • (Python)
2
26

APE

A CLI, Java API and RESTful API for the automated generation of computational pipelines (scientific workflows) from large collections of computational tools.

  • Java
  • Program synthesis
  • Workflow technologies
  • (ANTLR)
  • ("Common Workflow Language")
  • (Java)
5
26

laserchicken

Toolkit for preprocessing and feature calculation of point clouds created using airborne laser scanning

  • Big data
  • Machine learning
  • ("Jupyter Notebook")
  • (Python)
12
26

LinkAhead

Open Source Research Data Management Software

  • Data
  • Electronic Lab Notebook
  • ETL
  • + 9
  • (ANTLR)
  • (C++)
  • (CSS)
  • + 9
6
26

MUSCLE3

MUSCLE3 is a coupling library for building multiscale simulations out of single-scale models.

  • High performance computing
  • Multi-scale & multi model simulations
  • (C)
  • (C++)
  • (Dockerfile)
  • + 4
4
26

Code underlying the publication: Forecasting estuarine salt intrusion in the Rhine-Meuse delta using an LSTM model

Code underlying the publication: Forecasting estuarine salt intrusion in the Rhine-Meuse delta using an LSTM model

  • chloride
  • Delta
  • estuary
  • + 7
4
25

DeepRank2

DeepRank2 is an open-source deep learning framework for data mining of protein-protein interfaces or single-residue missense variants. This package is an improved and unified version of three previously developed packages: DeepRank, DeepRank-GNN and DeepRank-Mut.

  • Cancer vaccine
  • Convolutional Neural Network
  • Deep Learning Framework
  • + 5
  • (Dockerfile)
  • ("Jupyter Notebook")
  • (Python)
  • + 1
12
25

PyBanshee, Python-based open source of the MATLAB toolbox BANSHEE.

PyBanshee, Python-based open source of the MATLAB toolbox BANSHEE.

  • Bayesian network models
  • Gaussian copula
  • Python package
6
24

Measurements.jl

Error propagation calculator and library for physical measurements. It supports real and complex numbers with uncertainty, arbitrary precision calculations, operations with arrays, and numerical integration.

  • error propagation
  • Julia Package
  • Physics
  • + 1
  • (Julia)
1
24

Cross-Domain Classification of Moral Values - code

Cross-Domain Classification of Moral Values - code

  • Cross-domain
  • Ethics
  • Morality
  • + 3
  • (Markdown)
  • (Other)
  • (Python)
5
23

DoE2Vec

DoE2Vec is a self-supervised approach to learn exploratory landscape analysis features from design of experiments. The model can be used for downstream meta-learning tasks such as learninig which optimizer works best on a given optimization landscape.

  • Machine learning
  • optimization
  • python
  • (Makefile)
  • (Python)
  • (R)
1
23

Code supporting the publication: Gromit: Benchmarking the performance and scalability of blockchain systems

Code supporting the publication: Gromit: Benchmarking the performance and scalability of blockchain systems

  • Benchmarking
  • Blockchain
  • Performance
  • + 1
  • (JSON)
  • (Markdown)
  • (Other)
  • + 3
3
22

Arena-Crowds

Arena-Crowds is Python scripts for the data analysis to estimate crowd density based on WiFi positioning.

  • Computer networks
  • Networks
  • Network Science
  • ("Jupyter Notebook")
  • (Python)
3
22