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1324 software items. Page 19 of 28. 48 items per page.
865-912 of 1324

i-VRESSE bartender

Bartender is a middleware web service to schedule jobs on various infrastructures.

  • Workflow technologies
  • (Dockerfile)
  • (Mako)
  • (Python)
3
0

BeamSchemeV1

Assists in extracting 1D profiles from 2D datasets. Calculates over 90 different parameters.

  • Treatment Planning and dosimetry
  • (CSS)
  • (JavaScript)
  • (Pascal)
0
0

BGC Viewer

A viewer for biosynthetic gene cluster data.

  • bioinformatics
  • Gene Clusters
  • natural products
  • + 1
  • (CSS)
  • (Dockerfile)
  • (HTML)
  • + 6
6
0

BIOMERO

a scalable and extensible image analysis framework

  • biaflows
  • bioimaging
  • biomero
  • + 9
  • (Dockerfile)
  • (Python)
  • (Shell)
1
0

bird-cloud-gnn

bird-cloud-gnn is a Python package that helps generate a graph representation from point cloud data and fits graph neural networks for classification problem

  • Classification
  • Graph Neural Network
  • Machine learning
  • + 2
  • (Python)
4
0

Bistromath

BistroMath is designed as add-on to the measuring software of water phantom systems used in radiotherapy.

  • Treatment Planning and dosimetry
0
0

boatswain

Boatswain is a simple build system for docker images. It is especially useful when you have multiple docker images that depend on each other.

  • containers
  • docker
  • (Dockerfile)
  • (Python)
2
0

Brei

a minimalist workflow system in Python

  • python
  • Workflow technologies
  • (Nix)
  • (Python)
1
0

BridgeDbR

R package for the BridgeDb Java library making identifier mapping functionality available in the R environment.

  • persistent identifiers
  • Statistics
  • (HTML)
  • (R)
  • (TeX)
0
0

BridgeDb Webservice

REST API for identifier mapping

  • persistent identifiers
  • REST API
  • webservice
  • (HTML)
  • (Java)
  • (JavaScript)
2
0

BroadLineRegions.jl

A fast and flexible toolkit for modeling the broad-line region (BLR) in Julia.

  • astronomy
  • Astrophysics
  • (Julia)
  • (TeX)
0
0

c3s-magic-wps

Web Processing Service for Climate Data Analysis in the MAGIC project.

  • (Dockerfile)
  • (Makefile)
  • (Python)
  • + 1
5
0

CAExplorer.jl

A widget that lets you explore the dynamics of a particular cellular automaton that operates on a 5x5 stencil. We use this CA in the context of the carbonate platform modelling toolkit CarboKitten.jl.

  • Agent-based modeling
  • Interactive Visualization
  • Julia Language
  • (Julia)
1
0

Canadian Advanced Network for Astronomical Research (CANFAR)

The Canadian Advanced Network for Astronomy Research (CANFAR) is a consortium that serves data-intensive storage, access, and processing needs of university groups and centers engaged in astronomy research.

  • authenticated
  • CANFAR
  • condor
  • + 6
2
0

Canadian Writing Research Collaboratory (CWRC)

CWRC aims to make digital research methods broadly accessible, and to develop an active community of researchers engaged in exploring the potential of collaboration online.

  • Canadian culture & history
  • cultural studies
  • digital humanities
  • + 1
  • (ActionScript)
  • (Batchfile)
  • ("Classic ASP")
  • + 16
1
0

CanDIG CHORD

CHORD is a project to build a federated, Canadian, national data service for privacy- sensitive genomic and related health data. It allows the technologies and services being built by CanDIG and its international partners to be made available to the Canadian health research community more broadly.

  • CanDIG
  • GA4GH
  • genomics
  • (Lua)
  • (Python)
  • (Shell)
1
0

CanGeo Project

The goal of this project is to provide a web service providing inland waterbodies initially available on GeoBase and updated using the most recent Landsat-8 imagery.

  • canada
  • GeoRSS
  • imagery
  • + 7
0
0

CanWIN

CanWIN (Canadian Watershed Information Network) is the data centre for the Centre for Earth Observation Science (CEOS). We support research and education, and inform management, policy and evidence based decision-making from the Nelson River Watershed to the Arctic.

  • Arctic
  • geospatial
  • metadata
  • + 4
1
0

CarboKitten.jl

A toolkit for forward modelling of stratigraphic record of carbonate platforms, written in Julia.

  • Geosciences
  • Julia Language
  • modelling
  • (Julia)
  • (Makefile)
2
0

Carbon Budget Explorer (CABE)

Web application to visualize countries' carbon emission pathways under various views on fairness.

  • (CSS)
  • (HTML)
  • (JavaScript)
  • + 3
3
0

caselawnet

Caselawnet constructs citation networks from collections of Dutch case law.

  • Big data
  • (CSS)
  • (HTML)
  • ("Jupyter Notebook")
  • + 1
2
0

CAT

CAT is a collection of tools designed for the construction of various chemical compounds.

  • High performance computing
  • (Python)
  • (Shell)
1
0

ccglib

The Complex Common GEMM Library (ccglib) provides mixed-precision matrix-matrix multiplication kernels for complex data.

  • CUDA
  • GPU
  • High performance computing
  • + 1
  • (C)
  • (C++)
  • (CMake)
  • + 3
5
0

CDF2Medmij-Mapping-tool

The CDF2Medmij-Mapping-tool facilitates the seamless transformation of cohort data into MedMij-compliant FHIR formats, enabling the harmonization of diverse datasets within a federated learning infrastructure.

  • (CSS)
  • (HTML)
  • (JavaScript)
  • + 2
1
0

Ceiba

Ceiba and its command-line interface Ceiba-cli solve the problem of computing, storing, and securely sharing computationally expensive simulation results.

  • Optimized data handling
  • (Dockerfile)
  • (Python)
  • (Shell)
  • + 1
2
0

ceiba-cli

command line interface to interact to interact with the ceiba web server

  • Optimized data handling
  • (Python)
1
0

Cerise

Cerise is a service for running CWL workflows on HPC resources. You add software, tool descriptions, and connection information, then your user runs workflows whenever they want.

  • High performance computing
  • Optimized data handling
  • Workflow technologies
  • ("Common Workflow Language")
  • (Dockerfile)
  • (Makefile)
  • + 2
1
0

CERR

CERR (pronounced 'sir'), stands for Computational Environment for Radiological Research. CERR is MATLAB based software platform for developing and sharing research results using radiation therapy treatment planning and imaging informatics.

  • Treatment Planning and dosimetry
  • ("AGS Script")
  • (Batchfile)
  • (C)
  • + 20
0
0

cerulean

A Python 3 library for talking to HPC clusters and supercomputers.

  • High performance computing
  • SFTP
  • SLURM
  • + 2
  • (Dockerfile)
  • (Python)
  • (Shell)
1
0

Cesium-ncWMS

Web Application that visualizes data stored in the NetCDF format on a globe.

  • Visualization
  • (CSS)
  • (Dockerfile)
  • (HTML)
  • + 1
2
0

cffconvert GitHub Action

GitHub action to validate CITATION.cff files, and convert to other citation formats using the dockerized version of cffconvert

3
0

CHAMP-EU

The Cornell-Holland Ab-initio Materials Package (CHAMP) is a quantum Monte Carlo suite of programs for electronic structure calculations. The code is developed by Claudia Filippi and Saverio Moroni, with significant contributions by Ravindra Shinde, N. Renaud, V. Azizi, E. Landinez, and S. Shepard.

  • Chemistry
  • High performance computing
  • Physics
  • + 1
  • (Assembly)
  • (Berry)
  • (Brainfuck)
  • + 14
7
0

check-deps

This Python script checks whether a given set of software dependencies is met. This script itself is completely stand-alone and depends only on Python being installed. You may include this script along with a `dependencies.ini` in a project that has a diverse set of dependencies.

  • Dependency Hell
  • python
  • Workflow technologies
  • (Awk)
  • (CSS)
  • (Makefile)
  • + 1
1
0

Chemical Analytics Platform

Chemical Analytics Platform is a freely available Virtual Machine encompassing tools, databases, and KNIME workflows.

  • Workflow technologies
  • (Shell)
  • (Smarty)
2
0

CIL

Provides modular optimisation framework for prototyping reconstruction methods. Tools for loading, preprocessing, visualising tomographic data.

  • Imaging and Image Processing
  • (C)
  • (C++)
  • (CMake)
  • + 2
0
0

Cityblocks

Python utility to generate local climate zone (LCZ) tiles for rendering in 3D in QGIS

  • (Python)
  • (QML)
2
0

classmodel/form

Form component that renders a JSON schema using Solid UI components.

2
0

CLASS-web

Implementation of the Chemistry Land-surface Atmosphere Soil Slab (CLASS) model that runs entirely in the browser. For more information on CLASS, see https://classmodel.github.io/.

  • web service
  • (CSS)
  • (HTML)
  • (JavaScript)
  • + 2
2
0

cleanX

CleanX is an open-source python library for exploring, cleaning and augmenting large datasets of X-rays, or certain other types of radiological images.

  • Image processing
  • Machine learning
  • (Dockerfile)
  • ("Jupyter Notebook")
  • (Python)
  • + 3
1
0

ClearCanvas

Provides an extensible and robust platform for medical imaging. Software derived from the project is not intended nor licensed for clinical use.

  • Software Engineering and Data Infrastructure
  • (ASP)
  • (C)
  • (C#)
  • + 7
0
0

ClimaNet

A Climate Aware Spatio Temporal Encoder Decoder

  • Big data
  • climate
  • deep learning
  • ("Jupyter Notebook")
  • (Python)
  • (Shell)
6
0

ClinDIG

ClinDIG provides a federated data management and analysis solution for clinical and genomic data while to provide opportunity for distributed analysis centred on protecting patient privacy.

  • clinical
  • federated
  • genomics
  • + 1
  • (CSS)
  • (Dockerfile)
  • ("Go Template")
  • + 5
2
0

ClinicalTemplateReader

Tool for automated planning in Eclipse. Supports different Eclipse versions.

  • Clinical workflow and applications
  • (C#)
0
0

clumped-processing

Clumped isotope measurement processing script for Thermo Fisher MAT 253 plus isotope ratio mass spectrometer with the Kiel IV

  • clumped isotope
  • Data Analysis
  • mass spectrometry
  • + 3
  • (HTML)
  • (R)
1
0

clumpedr

Clumpedr aims to facilitate analysis of clumped isotope data. It builds on isoreader which is used to import raw data files from the mass spectrometer, and most of the important data processing parts are based on Huntington et al. 2009 and Daëron et al. 2016.

  • Data Analysis
  • mass spectrometry
  • (Makefile)
  • (R)
  • (Rez)
2
0

Code Auditor

A package and command-line utility to audit code quality and compliance to the best practices.

  • code quality
  • conformity assessment
  • software development
  • (Python)
7
0

CoeusAI

The CoeusAI QGIS plugin is designed for exploration of multiband geospatial datasets. It lets the user iteratively train and retrain segmentation models in seconds. A combination of Deep learning and traditional machine learning is used, leveraging the best of both methods.

  • deep learning
  • gis
  • Machine learning
  • + 2
  • (Python)
3
0

Collens

Collens is a dynamic web-based tool designed for scholars to compare textual variants with annotations. Utilizing machine learning, it offers an efficient workflow for analyzing multiple versions of literary and scholarly documents.

  • digital humanities
  • Visualization
  • (CSS)
  • (HTML)
  • (JavaScript)
  • + 2
3
0