12 commitsLast commit ≈ 14 months ago6 stars4 forks
PanTools-pipeline-v4
General purpose Snakemake pipeline for PanTools v4.
5
contributors
Description
- Create a pangenome and run all major PanTools analysis functions for pangenomes.
- Create a panproteome and run all major PanTools analysis functions for panproteomes.
- Create a pangenome and run all PanTools analysis functions required to make a PanVa instance
Keywords
License
Participating organisations
Contributors
Contact person
SS
Sandra Smit
SS
Sandra Smit
Wageningen University
0000-0001-5239-5321DvW
Dirk-Jan van Workum
Wageningen University & Research
0000-0001-6247-5499DZ
Dionne Zaal
Bejo Zaden B.V.
0000-0002-8573-6484RvE
Roel van Esch
Wageningen University & Research
Thijs van Lankveld
Netherlands eScience Center
0009-0001-1147-4813Related projects
Scaling up pangenomics for plant breeding
Delivering a pangenome approach that drastically improves the analytical power on plant data
Updated 25 months ago
Finished