PanTools-pipeline-v4

General purpose Snakemake pipeline for PanTools v4.

11 commitsLast commit ≈ 3 months ago4 stars3 forks

What PanTools-pipeline-v4 can do for you

  • Create a pangenome and run all major PanTools analysis functions for pangenomes.
  • Create a panproteome and run all major PanTools analysis functions for panproteomes.
  • Create a pangenome and run all PanTools analysis functions required to make a PanVa instance
Keywords
Programming languages
  • Python 98%
  • Dockerfile 1%
  • Shell 1%
License
Not specified
</>Source code

Related projects

Scaling up pangenomics for plant breeding

Delivering a pangenome approach that drastically improves the analytical power on plant data

Updated 6 months ago
Finished