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PanTools-pipeline-v4
General purpose Snakemake pipeline for PanTools v4.
5
contributors
Description
- Create a pangenome and run all major PanTools analysis functions for pangenomes.
- Create a panproteome and run all major PanTools analysis functions for panproteomes.
- Create a pangenome and run all PanTools analysis functions required to make a PanVa instance
Keywords
License
Participating organisations
Contributors
Contact person
SS
SS
Sandra Smit
Wageningen University
DvW
Dirk-Jan van Workum
Wageningen University & Research
DZ
Dionne Zaal
Bejo Zaden B.V.
RvE
Roel van Esch
Wageningen University & Research
Thijs van Lankveld
Netherlands eScience Center
Related projects
Scaling up pangenomics for plant breeding
Delivering a pangenome approach that drastically improves the analytical power on plant data
Updated 17 months ago
Finished