All software
Introduction to Geospatial Raster and Vector Data with Python
This lesson material shows how practical geospatial data analysis tasks can be carried out using Python
- Data Analysis
- geospatial
- Image processing
- + 4
iReceptor Gateway
A Distributed Data Management System and Scientific Gateway for Mining Next Generation Sequence Data from Immune Responses.
- immunogenomics
- Immunology
- iReceptor
- PHP
- Shell
- Blade
- + 7
Lilio
A Python package for generating calendars to resample timeseries into training and target data for machine learning. Named after the inventor of the Gregorian Calendar.
- AI
- Preprocessing
- S2S
- Python
- Shell
NEBULA
The NEBULA (Nuxt & eScience Based Universal Learning Application) framework can be used to create an easily maintainable, version-controllable, web-based lesson collection. It uses Nuxt.js and Vue.js.
- teaching
- web
- Vue
- TypeScript
- SCSS
- + 1
s2spy
A high-level python package integrating expert knowledge and artificial intelligence to boost sub-seasonal to seasonal (S2S) forecasting.
- AI
- S2S
- Python
- Shell
SalientDetector-matlab
If you want to automate object detection or image photo-identification tasks in an easy way with open MATLAB software, the SalientDetector-MATLAB is right for you
- Image processing
- MATLAB
SalientDetector-python
If you want to automate your object detection or photo-identification image tasks in an easy way with free open-source software, the SalientDetector-Python is the tool for you
- Image processing
- Jupyter Notebook
- Python
- Makefile
SlicerRT
SlicerRT allows users to analyze spatio-temporal accumulation of the therapeutic dosage (radiation, thermal, etc.). Tools include dose visualization, quantitative metrics computation, comparison, and import/export to DICOM format.
- C++
- Python
- CMake
- + 1
Revisited Via Appia
Create visual storylines that involve media like images and videos embedded in a 3D environment with efficient Pointcloud data directly from the web browser.
- cultural heritage
- Digital Twins
- gis
- + 2
- JavaScript
- HTML
- Vue
- + 3
Importing a Roman Transport network
Use open Roman datasets via and import them into a NetLogo model, using the ORBIS dataset (http://orbis.stanford.edu/) to create a set of Roman settlements and major routes between them.
Out of Africa - Conditional isotropic diffusion
A reimplementation of the classical study by Young and Bettinger (1992) investigating the possible drivers behind the Out of Africa dispersal of modern humans.
Landscape and Land Cover Generation
This algorithm generates landscapes and landcovers in contiguous zones. Users can define different landscape types, landcovers and rules for settlement placement in the setup procedure. It is designed to allow flexible configuration of environmental and social parameters.
SyGMa
SyGMa provides fast and lightweight predictions of human metabolites to support discovery scientists design better and safer drugs
- Workflow technologies
- Python
Artifact for the Paper "Fast Verified SCCs for Probabilistic Model Checking"
Artifact for the Paper "Fast Verified SCCs for Probabilistic Model Checking"
- Correct-by-construction
- Gabow
- IRF
- + 13
AutoEncodersDLSCA
Code underlying the publication: Autoencoder-enabled model portability for reducing hyperparameter tuning efforts in side-channel analysis
- Autoencoders
- Hyperparameter Tuning
- Portability
- + 3
- Python
- Other
- Markdown
Automated xy calibration for 3D printers using a scanner
Automated xy calibration for 3D printers using a scanner
- 3D printer
- calibration
- FDM
- + 11
Code underlying the publication: Maintenance Optimization for Multi-Component Systems with a Single Sensor
Code underlying the publication: Maintenance Optimization for Multi-Component Systems with a Single Sensor
- Condition-based maintenance
- Inspection planning
- Maintenance
- + 2
- Python
- Other
Code underlying the publication: "PATE: Proximity-Aware Time series anomaly Evaluation"
Code underlying the publication: "PATE: Proximity-Aware Time series anomaly Evaluation"
- Anomaly detection
- Evaluation Metrics
- Precision
- + 2
- Python
- YAML
- Markdown
- + 1
Code underlying the publication: "Self-Supervised PPG Representation Learning Shows High Inter-Subject Variability"
Code underlying the publication: "Self-Supervised PPG Representation Learning Shows High Inter-Subject Variability"
- Autoencoder
- Human Activity Recognition
- Inter-Subject Variability
- + 3
- Python
- Other
- Markdown
- + 1
Data underlying the publication: Fabrication and Characterization of Pneumatic Unit Cell Actuators
Data underlying the publication: Fabrication and Characterization of Pneumatic Unit Cell Actuators
- characterization
- fabrication
- haptic display
- + 4
- Markdown
Data underlying the publication/thesis chapter: Scale Learning in Scale-Equivariant Convolutional Networks
Data underlying the publication/thesis chapter: Scale Learning in Scale-Equivariant Convolutional Networks
- computer vision
- Convolutional neural network (CNN)
- equivariance
- + 3
- Jupyter Notebook
- Python
- Markdown
- + 5
etv_scheduling
Code underlying the publication: An environmentally-aware dynamic planning of electric vehicles for aircraft towing considering stochastic aircraft arrival and departure times
- Dynamic scheduling
- Electric towing vehicles
- Stochastic scheduling
- + 2
- Python
- Markdown
- Other
- + 1
Inductive 3D printer XY calibration GUI
Inductive 3D printer XY calibration GUI
- 3D printer
- calibration
- FDM
- + 8
IUI2025_ConvXAI
User Interaction Dataset associated with IUI 2025 paper "Is Conversational XAI All You Need? Human-AI Decision Making With a Conversational XAI Assistant"
- Appropriate Reliance
- Conversational XAI Interface
- Human-AI Decision Making
- Jupyter Notebook
- Python
- Other
- + 1
mpcrl-for-ramp-metering
Source code for the publication: Reinforcement Learning with Model Predictive Control for Highway Ramp Metering
- Model predictive control
- Ramp Metering
- Reinforcement learning
- Python
- Other
- Markdown
- + 1
SNAPWF
Code underlying the publication: Automated Python workflow for generating Sentinel-1 PSI and SBAS interferometric stacks using SNAP on Geospatial Computing Platform
- InSAR
- Interferometric Stacks
- Open-Source Tools
- + 2
- Jupyter Notebook
- XML
- Python
- + 1
Summation of currents electromagnetic solver
Summation of currents electromagnetic solver
- Coil
- FEM
- Inductive
- + 6
Visible vapor plumes in a tropical wet forest: R script
Visible vapor plumes in a tropical wet forest: R script
- forest evaporation
- lifting condensation layer
- R script
- + 2
adhtools
Use adhtools for analyzing Arabic corpora.
- Text analysis & natural language processing
- Visualization
- Workflow technologies
- Jupyter Notebook
- Python
- Common Workflow Language
- + 1
dhdt
A photohypsometric Python library to estimate glacier elevation change via optical remote sensing imagery
- geospatial
- Glacier
- image
- + 2
- Python
- TeX
duqtools
Duqtools is a tool for Dynamic Uncertainty Quantification for Tokamak reactor simulations modelling.
- fusion-reactor
- modelling
- python
- + 2
- Jupyter Notebook
- Python
- Shell
eEcology Tracker calendar
Calendar overview with daily statistics of GPS-trackers used to track bird movements.
- Visualization
- Python
- Makefile
- JavaScript
- + 5
Entangled
Entangled makes literate programming easier. It keeps markdown and program source in sync. This makes it more convenient to extend and debug your literate code.
- Literate Programming
- open science
- python
- + 2
- Python
- C++
- Makefile
- + 2
eOSSR
The eOSSR is the Python library to programmatically manage the ESCAPE OSSR.
- jupyter-notebook
- repository
- research software
- + 2
- Python
- Dockerfile
ewatercycle
The eWaterCycle package makes it easier to use hydrological models without having intimate knowledge about how to install and run the models.
- Inter-operability & linked data
- Multi-scale & multi model simulations
- Optimized data handling
- + 1
- Python
- Dockerfile
fairtally
Create comprehensive reports on compliance with the fair-software.nl recommendations.
- Python
- Shell
- Dockerfile
fairworkflows
A python library for constructing, annotating and publishing scientific workflows described using semantic technologies.
- Python
- HTML
- Common Workflow Language
- + 1
frbcatdb
A database to store a catalog of Fast Radio Bursts and expose them as Virtual Observation Events.
- Optimized data handling
- Python
- Shell
frbcat-web
Provides an easy to-use web frontend to browse and filter the Fast Radio Burst Catalogue.
- Optimized data handling
- Visualization
- JavaScript
- CSS
- HTML
MOTrainer
Measurement Operator Trainer for data assimilation purposes.
- Data assimilation
- High performance computing
- Machine learning
- + 2
- Jupyter Notebook
- Python
- TeX
- + 1
NEWSGAC platform
Software for running the online platform of the NEWSGAC project for running explainable machine learning models on textual data
- Explainable AI
- Machine learning
- Text analysis & natural language processing
- Jupyter Notebook
- Python
- HTML
- + 4
ochre
A tool to clean up text generated by OCR using individual words as well as their context.
- Machine learning
- Text analysis & natural language processing
- Common Workflow Language
- Jupyter Notebook
- Python
- + 2
PathVisio
PathVisio is a free open-source software to curate biological pathway models.
- bioinformatics
- PathVisio
- Systems Biology
- + 2
- Java
- HTML
- JavaScript
- + 4
PIDIMEHS library
Showcases a diachronic analysis of the Dutch Royal Library's newspaper archive.
- Big data
- Real time data analysis
- Text analysis & natural language processing
- + 1
pyglotaran
A Python library for Global and Target Analysis of time-resolved spectroscopy data
- biophysics
- global analysis
- glotaran
- + 3
- Python
- Nix
Ricgraph - Research in context graph
With Ricgraph (Research in context graph), you can create a graph from research information that is stored in various source systems. You can explore this graph and discover relations you were not aware of.
- graph
- graph database
- research in context graph
- + 2
- Python
- Makefile
- Shell
- + 5
sfb-annotator
Annotate field books of natural history collections
- Inter-operability & linked data
- JavaScript
- Java
- CSS
- + 4
ShiCo
A visualization that shows how the meaning we attach to a given concept shifts over time.
- Text analysis & natural language processing
- Visualization
- Python
- JavaScript
- HTML
- + 3