All software
Syndat Dashboard
A Dashboard for evaluation & visualization of synthetic patient level data.
- data fidelity
- data privacy
- Interactive Dashboard
- + 1
- CSS
- Dockerfile
- HTML
- + 3
pbg-ld
Access integrated data on genes and associated traits in plants
- Data Analysis
- genomics
- Inter-operability & linked data
- Dockerfile
- Makefile
- PLpgSQL
- + 2
DALES
DALES is a large-eddy simulation code designed for studies of the physics of the atmospheric boundary layer, including convective and stable boundary layers as well as cloudy boundary layers.
- C
- CMake
- Fortran
- + 8
FastMLC
Detect clusters in for example large collections of DNA or protein sequences, and visualize the results in a web browser.
- Big data
- Machine learning
- Visualization
- C
- C++
- CMake
- + 5
MDStudio
A tool to run molecular dynamics workflows.
- High performance computing
- Real time data analysis
- Workflow technologies
- CSS
- Dockerfile
- HTML
- + 5
pdb2sql
Fast and versatile Python package that leverages SQL queries to parse, manipulate and process biomolecular structure files. The structure files should be in the PDB format and are available on www.rcsb.org.
- Big data
- Optimized data handling
- Makefile
- Python
- TeX
PSSMGen
Generates consistent PSSM and PDB files for protein-protein complexes
- Big data
- High performance computing
- Optimized data handling
- Makefile
- Python
PowerSensor3
PowerSensor is a low-cost, custom-built device that measures the instantaneous power consumption of GPUs and other devices at a high time resolution.
- GPU
- High performance computing
- C
- C++
- CMake
- + 3
eAstroViz
This tool can convert and visualize radio astronomy measurement sets, as well as most LOFAR intermediate data products. It also performs RFI mitigation.
- LOFAR
- radio astronomy
- RFI
- C
- C++
- Cuda
- + 3
LUE
LUE is software for storing and manipulating large amounts of information for large numbers of objects. The software is useful, and currently mainly used, in the context of environmental modelling of biological and physical systems, represented by agents and fields.
- Agent-based modeling
- environmental modelling
- field based modelling
- + 6
- Batchfile
- C
- C++
- + 6
Climate Rapid Evaluation Framework
Rapid Evaluation Framework for climate simulations
- Big data
- Climate modeling
- CSS
- Dockerfile
- Go Template
- + 6
Entangled
Entangled makes literate programming easier. It keeps markdown and program source in sync. This makes it more convenient to extend and debug your literate code.
- Literate Programming
- open science
- python
- + 2
- C
- C++
- Jinja
- + 3