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splithalfr

Estimates split-half reliabilities for scoring algorithms of cognitive tasks and questionnaires.

Data Analysis
Statistics

PanTools

PanTools is a pangenomic toolkit for comparative analysis of large number of genomes. It is developed in the Bioinformatics Group of Wageningen University, the Netherlands. Please cite the relevant publication(s) from the list of publications if you use PanTools in your research.

Data Analysis
Gene classification
pangenomics

Java
Snakemake
Python
+ 1

HyperCanny

Finds edges in high-dimensional data using the Canny algorithm.

Data Analysis
edge detection
High performance computing

C++
C
Python
+ 3

swyft

swyft is the official implementation of Truncated Marginal Neural Ratio Estimation, a hyper-efficient, simulation-based inference technique for complex data and expensive simulators.

Bayesian Inference
Data Analysis

Jupyter Notebook
Python

pbg-ld

Access integrated data on genes and associated traits in plants

Data Analysis
genomics
Inter-operability & linked data

PLpgSQL
Shell
Python
+ 2

COVID-19 Integrated Surveillance Data in Italy

COVID-19 integrated surveillance data provided by the Italian National Institute of Health and processed via UnrollingAverages.jl to deconvolve the weekly simple moving averages.

Clinical Data
Computational Epidemiology
COVID-19
+ 16

Julia
TeX
Python

jaspProcess

A JASP implementation of the PROCESS macro for SPSS

Data Analysis
Statistics
Visualization

PIQMIe

A web tool for mass spectrometry-based proteomics data analyses

Data Analysis
mass spectrometry
Optimized data handling
+ 2

HTML
JavaScript
Python
+ 3

AstronomicAL

An interactive dashboard for visualisation, integration and classification of data using Active Learning.

Active Learning
Classification
Data Analysis
+ 11

Python
TeX

Introduction to Geospatial Raster and Vector Data with Python

This lesson material shows how practical geospatial data analysis tasks can be carried out using Python

Data Analysis
geospatial
Image processing
+ 4

PanVA

Variant Analysis within Pangenomes.

API
Data Analysis
pangenomics

Vue
TypeScript
Python
+ 6

CBRAIN

CBRAIN is a flexible Ruby on Rails framework for accessing and processing of large data on high-performance computing infrastructures.

CBRAIN
cluster
Data Analysis
+ 6

Ruby
HTML
JavaScript
+ 3