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40 software items. Page 1 of 4. 12 items per page. 1 filters active.
1-12 of 40

GNU Astronomy Utilities (Gnuastro)

GNU Astronomy Utilities (Gnuastro) is an official GNU package consisting of various programs and library functions for the manipulation and analysis of (astronomical) data. All the programs share the same basic command-line user interface based on the GNU coding standards.

  • astronomy
  • Data Analysis
  • Image processing
  • + 4
  • C
  • C++
  • M4
  • + 3
4
189

ArrayAnalysis

ArrayAnalysis provides a user-friendly solution for transcriptomic data analysis. It allows researchers, regardless of their bioinformatics expertise, to efficiently analyse, explore, and interpret RNA sequencing and microarray datasets.

  • Data Analysis
  • data visualization
  • microarray
  • + 2
  • Batchfile
  • HTML
  • Inno Setup
  • + 2
2
149

PanTools

PanTools is a pangenomic toolkit for comparative analysis of large number of genomes. It is developed in the Bioinformatics Group of Wageningen University, the Netherlands. Please cite the relevant publication(s) from the list of publications if you use PanTools in your research.

  • Data Analysis
  • Gene classification
  • pangenomics
  • Java
  • Python
  • Roff Manpage
  • + 1
3
75

argopy

Argopy is a python library dedicated to Argo data access, manipulation and visualisation for standard users as well as Argo experts.

  • Data Analysis
  • Data processing
  • Earth and Environmental Sciences
  • + 3
  • CSS
  • Dockerfile
  • Python
  • + 1
2
43

HyperCanny

Finds edges in high-dimensional data using the Canny algorithm.

  • Data Analysis
  • edge detection
  • High performance computing
  • C
  • C++
  • Makefile
  • + 3
1
39

swyft

swyft is the official implementation of Truncated Marginal Neural Ratio Estimation, a hyper-efficient, simulation-based inference technique for complex data and expensive simulators.

  • Bayesian Inference
  • Data Analysis
  • Jupyter Notebook
  • Python
5
30

pbg-ld

Access integrated data on genes and associated traits in plants

  • Data Analysis
  • genomics
  • Inter-operability & linked data
  • Dockerfile
  • Makefile
  • PLpgSQL
  • + 2
4
16

PanVA

Variant Analysis within Pangenomes.

  • API
  • Data Analysis
  • pangenomics
  • CSS
  • Dockerfile
  • HTML
  • + 6
2
14

COVID-19 Integrated Surveillance Data in Italy

COVID-19 integrated surveillance data provided by the Italian National Institute of Health and processed via UnrollingAverages.jl to deconvolve the weekly simple moving averages.

  • Clinical Data
  • Computational Epidemiology
  • COVID-19
  • + 16
  • Julia
  • Python
  • TeX
2
13

jaspProcess

A JASP implementation of the PROCESS macro for SPSS

  • Data Analysis
  • Statistics
  • Visualization
  • QML
  • R
2
7

Result Assessment Tool (RAT)

The Result Assessment Tool (RAT) is a free, open-source research toolbox for collecting, analyzing, and evaluating search results.

  • computer science
  • Data Analysis
  • Information Retrieval
  • + 6
  • CSS
  • Go Template
  • HTML
  • + 4
5
7

PIQMIe

A web tool for mass spectrometry-based proteomics data analyses

  • Data Analysis
  • mass spectrometry
  • Optimized data handling
  • + 2
  • Dockerfile
  • HTML
  • JavaScript
  • + 3
1
5