All software
ArrayAnalysis
ArrayAnalysis provides a user-friendly solution for transcriptomic data analysis. It allows researchers, regardless of their bioinformatics expertise, to efficiently analyse, explore, and interpret RNA sequencing and microarray datasets.
- Data Analysis
- data visualization
- microarray
- + 2
- R
- HTML
- Batchfile
- + 2
splithalfr
Estimates split-half reliabilities for scoring algorithms of cognitive tasks and questionnaires.
- Data Analysis
- Statistics
- R
PanTools
PanTools is a pangenomic toolkit for comparative analysis of large number of genomes. It is developed in the Bioinformatics Group of Wageningen University, the Netherlands. Please cite the relevant publication(s) from the list of publications if you use PanTools in your research.
- Data Analysis
- Gene classification
- pangenomics
- Java
- Snakemake
- Python
- + 1
HyperCanny
Finds edges in high-dimensional data using the Canny algorithm.
- Data Analysis
- edge detection
- High performance computing
- C++
- C
- Python
- + 3
swyft
swyft is the official implementation of Truncated Marginal Neural Ratio Estimation, a hyper-efficient, simulation-based inference technique for complex data and expensive simulators.
- Bayesian Inference
- Data Analysis
- Jupyter Notebook
- Python
argopy
Argopy is a python library dedicated to Argo data access, manipulation and visualisation for standard users as well as Argo experts.
- Data Analysis
- Data processing
- Earth and Environmental Sciences
- + 3
- Python
- CSS
- Shell
- + 1
pbg-ld
Access integrated data on genes and associated traits in plants
- Data Analysis
- genomics
- Inter-operability & linked data
- PLpgSQL
- Shell
- Python
- + 2
COVID-19 Integrated Surveillance Data in Italy
COVID-19 integrated surveillance data provided by the Italian National Institute of Health and processed via UnrollingAverages.jl to deconvolve the weekly simple moving averages.
- Clinical Data
- Computational Epidemiology
- COVID-19
- + 16
- Julia
- TeX
- Python
jaspProcess
A JASP implementation of the PROCESS macro for SPSS
- Data Analysis
- Statistics
- Visualization
- R
- QML
PanVA
Variant Analysis within Pangenomes.
- API
- Data Analysis
- pangenomics
- Vue
- TypeScript
- Python
- + 6
PIQMIe
A web tool for mass spectrometry-based proteomics data analyses
- Data Analysis
- mass spectrometry
- Optimized data handling
- + 2
- HTML
- JavaScript
- Python
- + 3
AstronomicAL
An interactive dashboard for visualisation, integration and classification of data using Active Learning.
- Active Learning
- Classification
- Data Analysis
- + 11
- Python
- TeX