minimism
A minimal distributed MPI port from UFEMISM, used as a basis for UFEMISM2.0
- Finite volume method
- ice sheet
- MPI
- + 1
- (Fortran)
- (Makefile)
- (Mathematica)
- + 4
mkdocs rich argparse
An MkDocs plugin to generate documentation for a rich argparse parser. It renders commands, sub commands and sub-sub commands which can have rich help messages.
- python
- (Python)
ModuleMixins.jl
Make your Julia modules composable! With ModuleMixins you can design larger programs in Julia, building out components by merging structure definitions from smaller components, similar to designing an [Entity Component System](https://en.wikipedia.org/wiki/Entity_component_system).
- Entity Component System
- Julia Package
- Metaprogramming
- + 2
- (Julia)
OMUSE
A Python environment to interface and couple oceanographic and other earth system model codes.
- High performance computing
- Multi-scale & multi model simulations
- (Batchfile)
- (C)
- (C++)
- + 10
oTree Demo Experiments
oTree demo experiment: Public goods game
- behavioral research
- oTree
- Workflow technologies
- (HTML)
- (JavaScript)
- (Procfile)
- + 1
Parcels
Parcels (Probably A Really Computationally Efficient Lagrangian Simulator) is a set of Python classes and methods to create customisable particle tracking simulations using output from Ocean Circulation models. Parcels can be used to track passive and active particulates such as plastic and fish.
- lagrangian-ocean-modelling
- ocean-circulation-models
- particles
- (Python)
PBI
An open-source python package to identify breakthrough innovations within patents.
- Breakthrough innovations
- jupyter notebooks
- parallel computing
- + 2
- (Python)
pdbtbx-ts
Want to parse Protein Data Bank files in JavaScript
- Optimized data handling
- (JavaScript)
- (Rust)
- (TypeScript)
powerfit
Rigid body fitting of atomic strucures in cryo-electron microscopy density maps
- cryo-electron microscopy
- macromolecular structure
- map fitting
- (C)
- (Cython)
- (Dockerfile)
- + 1
protein-detective
Python package to detect proteins in EM density maps.
- (Python)
protein-quest
Python package to search/retrieve/filter proteins and protein structures
- (Python)
PuReGoMe
Analyzes social media messages for polarity and stance towards governmental COVID-19 measures
- Machine learning
- Social media
- ("Jupyter Notebook")
- (Python)
- (Shell)