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Utrecht University

Utrecht University

Utrecht, The Netherlands

One of the largest and oldest research universities in the Netherlands.

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www.uu.nl
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Software (58)Projects (37)Releases (255)

2025

63 releases
Oct 24, 2025
protein-quest
v0.7.0
Stefan Verhoeven, Anna Engel, Alexandre Bonvin
DOI: 10.5281/zenodo.17434910
Oct 16, 2025
TulipaEnergyModel
v0.18.2
Abel Soares Siqueira, Diego A. Tejada-Arango, Germán Morales-España, Grigory Neustroev, Juha Kiviluoma, Lauren Clisby, Maaike Elgersma, Ni Wang, Suvayu Ali, Zhi Gao
DOI: 10.5281/zenodo.17368136
Oct 09, 2025
TulipaEnergyModel
v0.18.1
Abel Soares Siqueira, Diego A. Tejada-Arango, Germán Morales-España, Grigory Neustroev, Juha Kiviluoma, Lauren Clisby, Maaike Elgersma, Ni Wang, Suvayu Ali, Zhi Gao
DOI: 10.5281/zenodo.17303861
Oct 09, 2025
iBridges
v2.0.0
chStaiger, J.P. Mc Farland, Tim, qubixes, Maarten Schermer, simstoica, Dawa Ometto, Terrell Russell, Sietse Snel, jtersteegwur, Jonathan de Bruin, Mark Schenk
DOI: 10.5281/zenodo.17301187
Oct 06, 2025
protein-quest
v0.6.0
Stefan Verhoeven, Anna Engel, Alexandre Bonvin
DOI: 10.5281/zenodo.17277771
Oct 01, 2025
protein-quest
v0.5.1
Stefan Verhoeven, Anna Engel, Alexandre Bonvin
DOI: 10.5281/zenodo.17242765
Oct 01, 2025
protein-quest
v0.5.0
Stefan Verhoeven, Anna Engel, Alexandre Bonvin
DOI: 10.5281/zenodo.17241936
Sep 29, 2025
APE
v2.5.3
Vedran Kasalica, Lamprecht Anna-Lena, Mario Frank, Haverkort Koen, Voshol Maurin
DOI: 10.5281/zenodo.17226697
Sep 23, 2025
mibitrans
v0.4.0
Jorrit Yvo Bakker, Alraune Zech, Sona Aseyednezhad, Robin Richardson, Jaro Camphuijsen
DOI: 10.5281/zenodo.17184933
Sep 22, 2025
protein-quest
v0.4.0
Stefan Verhoeven, Anna Engel, Alexandre Bonvin
DOI: 10.5281/zenodo.17175779
Sep 17, 2025
iBridges
v1.5.2
chStaiger, J.P. Mc Farland, Tim, qubixes, Maarten Schermer, simstoica, Dawa Ometto, Terrell Russell, Sietse Snel, jtersteegwur, Jonathan de Bruin, Mark Schenk
DOI: 10.5281/zenodo.17139123
Sep 16, 2025
TulipaEnergyModel
v0.18.0
Abel Soares Siqueira, Diego A. Tejada-Arango, Germán Morales-España, Grigory Neustroev, Juha Kiviluoma, Lauren Clisby, Maaike Elgersma, Ni Wang, Suvayu Ali, Zhi Gao
DOI: 10.5281/zenodo.17138065
Sep 16, 2025
mibiscreen
v0.6.0
Alraune Zech, Sona Aseyednezhad, Robin Richardson, Jaro Camphuijsen
DOI: 10.5281/zenodo.17130182
Sep 08, 2025
protein-quest
v0.3.2
Stefan Verhoeven, Anna Engel, Alexandre Bonvin
DOI: 10.5281/zenodo.17076066
Sep 01, 2025
protein-quest
v0.3.1
Stefan Verhoeven, Anna Engel, Alexandre Bonvin
DOI: 10.5281/zenodo.17018572
Aug 25, 2025
protein-quest
v0.3.0
Stefan Verhoeven, Anna Engel, Alexandre Bonvin
DOI: 10.5281/zenodo.16941289
Aug 20, 2025
haddock3
2025.8.0
Joao Teixeira, Rodrigo Honorato, Marco Giulini, Alexandre Bonvin, Sarah Alidoost, Victor Reys, Brian Jimenez, Douwe Schulte, Charlotte van Noort, Stefan Verhoeven, Barbara Vreede, SSchott, Regen Tsai
DOI: 10.5281/zenodo.16914680
Aug 11, 2025
TulipaEnergyModel
v0.17.1
Abel Soares Siqueira, Diego A. Tejada-Arango, Germán Morales-España, Grigory Neustroev, Juha Kiviluoma, Lauren Clisby, Maaike Elgersma, Ni Wang, Suvayu Ali, Zhi Gao
DOI: 10.5281/zenodo.16795672
Aug 11, 2025
LUE
0.3.10
Kor de Jong, Oliver Schmitz
DOI: 10.5281/zenodo.16792016
Aug 07, 2025
Parcels
v3.1.4
Erik Van Sebille, Christian Kehl, Michael Lange, Philippe Delandmeter, The Parcels contributors
DOI: 10.5281/zenodo.16759215
Aug 06, 2025
Parcels
v3.1.3
Erik Van Sebille, Christian Kehl, Michael Lange, Philippe Delandmeter, The Parcels contributors
DOI: 10.5281/zenodo.16754107
Jul 17, 2025
TulipaEnergyModel
v0.17.0
Abel Soares Siqueira, Diego A. Tejada-Arango, Germán Morales-España, Grigory Neustroev, Juha Kiviluoma, Lauren Clisby, Maaike Elgersma, Ni Wang, Suvayu Ali, Zhi Gao
DOI: 10.5281/zenodo.16040784
Jun 24, 2025
mibiscreen
v0.5.0
Alraune Zech, Sona Aseyednezhad, Robin Richardson, Jaro Camphuijsen
DOI: 10.5281/zenodo.15730498
Jun 10, 2025
iBridges
v1.5.1
chStaiger, J.P. Mc Farland, Tim, qubixes, Maarten Schermer, simstoica, Dawa Ometto, Terrell Russell, Sietse Snel, jtersteegwur, Jonathan de Bruin, Mark Schenk
DOI: 10.5281/zenodo.15631377
May 26, 2025
TulipaEnergyModel
v0.16.0
Abel Soares Siqueira, Diego A. Tejada-Arango, Germán Morales-España, Grigory Neustroev, Juha Kiviluoma, Lauren Clisby, Maaike Elgersma, Ni Wang, Suvayu Ali, Zhi Gao
DOI: 10.5281/zenodo.15519978
May 08, 2025
iBridges
v1.5.0
chStaiger, J.P. Mc Farland, Tim, qubixes, Maarten Schermer, simstoica, Dawa Ometto, Terrell Russell, Sietse Snel, jtersteegwur, Jonathan de Bruin, Mark Schenk
DOI: 10.5281/zenodo.15365851
May 08, 2025
iBridges
v1.5.0
chStaiger, J.P. Mc Farland, Tim, qubixes, Maarten Schermer, simstoica, Dawa Ometto, Terrell Russell, Sietse Snel, jtersteegwur, Jonathan de Bruin, Mark Schenk
DOI: 10.5281/zenodo.15365680
May 06, 2025
pyTAMS
v0.0.5
Lucas Esclapez
DOI: 10.5281/zenodo.15349506
May 02, 2025
pyTAMS
v0.0.4
Lucas Esclapez
DOI: 10.5281/zenodo.15325507
Apr 25, 2025
TulipaEnergyModel
v0.15.1
Abel Soares Siqueira, Diego A. Tejada-Arango, Germán Morales-España, Grigory Neustroev, Juha Kiviluoma, Lauren Clisby, Maaike Elgersma, Ni Wang, Suvayu Ali, Zhi Gao
DOI: 10.5281/zenodo.15283508
Apr 10, 2025
TulipaEnergyModel
v0.15.0
Abel Soares Siqueira, Diego A. Tejada-Arango, Germán Morales-España, Grigory Neustroev, Juha Kiviluoma, Lauren Clisby, Maaike Elgersma, Ni Wang, Suvayu Ali, Zhi Gao
DOI: 10.5281/zenodo.15190850
Apr 08, 2025
xarray-regrid
v0.4.1
Bart Schilperoort, Yang Liu, Keith Doore, Sam Levang, Ben Mares
DOI: 10.5281/zenodo.15176942
Apr 08, 2025
mibiscreen
v0.4.0
Alraune Zech, Sona Aseyednezhad, Robin Richardson, Jaro Camphuijsen
DOI: 10.5281/zenodo.15175464
Apr 02, 2025
TulipaEnergyModel
v0.14.1
Abel Soares Siqueira, Diego A. Tejada-Arango, Germán Morales-España, Grigory Neustroev, Juha Kiviluoma, Lauren Clisby, Maaike Elgersma, Ni Wang, Suvayu Ali, Zhi Gao
DOI: 10.5281/zenodo.15124601
Mar 28, 2025
iBridges
v1.4.0
chStaiger, J.P. Mc Farland, Tim, qubixes, Maarten Schermer, simstoica, Dawa Ometto, Terrell Russell, Sietse Snel, jtersteegwur, Jonathan de Bruin, Mark Schenk
DOI: 10.5281/zenodo.15100821
Mar 24, 2025
mibitrans
v0.3.0
Jorrit Yvo Bakker, Alraune Zech, Sona Aseyednezhad, Robin Richardson, Jaro Camphuijsen
DOI: 10.5281/zenodo.15078298
Mar 24, 2025
mibiscreen
v0.3.1
Alraune Zech, Sona Aseyednezhad, Robin Richardson, Jaro Camphuijsen
DOI: 10.5281/zenodo.15077779
Mar 24, 2025
TulipaEnergyModel
v0.14.0
Abel Soares Siqueira, Diego A. Tejada-Arango, Germán Morales-España, Grigory Neustroev, Juha Kiviluoma, Lauren Clisby, Maaike Elgersma, Ni Wang, Suvayu Ali, Zhi Gao
DOI: 10.5281/zenodo.15077278
Mar 24, 2025
mibiscreen
v0.3.0
Alraune Zech, Sona Aseyednezhad, Robin Richardson, Jaro Camphuijsen
DOI: 10.5281/zenodo.15075965
Mar 11, 2025
TulipaEnergyModel
v0.13.0
Abel Soares Siqueira, Diego A. Tejada-Arango, Germán Morales-España, Grigory Neustroev, Juha Kiviluoma, Lauren Clisby, Maaike Elgersma, Ni Wang, Suvayu Ali, Zhi Gao
DOI: 10.5281/zenodo.15006943
Feb 18, 2025
TulipaEnergyModel
v0.12.0
Abel Soares Siqueira, Diego A. Tejada-Arango, Germán Morales-España, Grigory Neustroev, Juha Kiviluoma, Lauren Clisby, Maaike Elgersma, Ni Wang, Suvayu Ali, Zhi Gao
DOI: 10.5281/zenodo.14888748
Feb 10, 2025
Parcels
v3.1.2
Erik Van Sebille, Christian Kehl, Michael Lange, Philippe Delandmeter, The Parcels contributors
DOI: 10.5281/zenodo.14845686
Feb 10, 2025
mibiscreen
v0.2.1
Alraune Zech, Sona Aseyednezhad, Robin Richardson, Jaro Camphuijsen
DOI: 10.5281/zenodo.14845639
Feb 10, 2025
mibiscreen
v0.2.0
Alraune Zech, Sona Aseyednezhad, Robin Richardson, Jaro Camphuijsen
DOI: 10.5281/zenodo.14845509
Feb 10, 2025
mibitrans
v0.2.2
Jorrit Yvo Bakker, Alraune Zech, Sona Aseyednezhad, Robin Richardson, Jaro Camphuijsen
DOI: 10.5281/zenodo.14845440
Feb 10, 2025
mibitrans
v0.2.1
Jorrit Yvo Bakker, Alraune Zech, Sona Aseyednezhad, Robin Richardson, Jaro Camphuijsen
DOI: 10.5281/zenodo.14844992
Feb 06, 2025
Unraphael
0.3
Thijs Vroegh, Stef Smeets
DOI: 10.5281/zenodo.14825927
Jan 31, 2025
mibitrans
v0.2.0
Alraune Zech, Sona Aseyednezhad, Robin Richardson, Jaro Camphuijsen, Jorrit Yvo Bakker
DOI: 10.5281/zenodo.14780158
Jan 31, 2025
mibitrans
v0.1.2
Alraune Zech, Sona Aseyednezhad, Robin Richardson, Jaro Camphuijsen, Jorrit Yvo Bakker
DOI: 10.5281/zenodo.14779357
Jan 31, 2025
mibitrans
v0.1.1
Alraune Zech, Sona Aseyednezhad, Robin Richardson, Jaro Camphuijsen, Jorrit Yvo Bakker
DOI: 10.5281/zenodo.14779164
Jan 29, 2025
pyTAMS
v0.0.3
Lucas Esclapez
DOI: 10.5281/zenodo.14762701
Jan 29, 2025
TulipaEnergyModel
v0.11.0
Abel Soares Siqueira, Diego A. Tejada-Arango, Germán Morales-España, Grigory Neustroev, Juha Kiviluoma, Lauren Clisby, Maaike Elgersma, Ni Wang, Suvayu Ali, Zhi Gao
DOI: 10.5281/zenodo.14761062