Netherlands eScience Center
National platform for the development and application of domain overarching software and methods for the scientific community
AMBER
A real-time pipeline to search for Fast Radio Bursts and other transient radio sources.
- Big data
- GPU
- High performance computing
- + 1
- (C++)
- (CMake)
KNIME Pharmacophore
A plugin for the KNIME workflow system that adds a Pharmacophore data type and nodes to read, write, and align them.
- Workflow technologies
- (Java)
KNIME PLANTS
A node for the KNIME workflow system that allows you to use the PLANTS protein-ligand docking algorithm.
- Workflow technologies
- (Java)
- (Mustache)
KNIME Python node archetype
Want to write your own KNIME node wrapping a Python library. Then use the KNIME Python node archetype to generate a node skeleton repository with sample code
- Big data
- Workflow technologies
- (Java)
- (Python)
KNIME Python wrapper
If you are developing a KNIME node which calls some Python code, then the KNIME Python wrapper can help you.
- Workflow technologies
- (Java)
- (Python)
KNIME Silicos-it nodes
A node for the KNIME workflow systems that allows you to use the Silicos-it software to filter or align molecules.
- Workflow technologies
- (Java)
SyGMa
SyGMa provides fast and lightweight predictions of human metabolites to support discovery scientists design better and safer drugs
- Workflow technologies
- (Python)
3D-e-Chem Virtual Machine
A freely available Virtual Machine encompassing tools, databases, and workflows for cheminformaticians, including new resources developed for ligand binding site comparisons and GPCR research.
- Inter-operability & linked data
- Workflow technologies
- (Shell)
- (Smarty)
adhtools
Use adhtools for analyzing Arabic corpora.
- Text analysis & natural language processing
- Visualization
- Workflow technologies
- ("Common Workflow Language")
- (Java)
- ("Jupyter Notebook")
- + 1
AHN2 pointcloud viewer
A web application able to visualize the AHN2 point cloud data of the Netherlands.
- Big data
- Real time data analysis
- Visualization
- (CSS)
- (Dockerfile)
- (HTML)
- + 1
AHN point cloud viewer web service
A web service to serve large point cloud data efficiently using octrees.
- Big data
- Visualization
- (Java)
- (Python)
aiproteomics
Generate and compare deep learning models for generating synthetic mass spectral libraries
- Machine learning
- mass spectrometry
- phosphoproteomics
- + 1
- ("Jupyter Notebook")
- (Python)
- (Shell)