Netherlands eScience Center
National platform for the development and application of domain overarching software and methods for the scientific community
SyGMa
SyGMa provides fast and lightweight predictions of human metabolites to support discovery scientists design better and safer drugs
- Workflow technologies
- Python
3D-e-Chem Virtual Machine
A freely available Virtual Machine encompassing tools, databases, and workflows for cheminformaticians, including new resources developed for ligand binding site comparisons and GPCR research.
- Inter-operability & linked data
- Workflow technologies
- Shell
- Smarty
adhtools
Use adhtools for analyzing Arabic corpora.
- Text analysis & natural language processing
- Visualization
- Workflow technologies
- Jupyter Notebook
- Python
- Common Workflow Language
- + 1
AHN2 pointcloud viewer
A web application able to visualize the AHN2 point cloud data of the Netherlands.
- Big data
- Real time data analysis
- Visualization
- JavaScript
- HTML
- CSS
- + 1
AHN point cloud viewer web service
A web service to serve large point cloud data efficiently using octrees.
- Big data
- Visualization
- Java
- Python
aiproteomics
Generate and compare deep learning models for generating synthetic mass spectral libraries
- Machine learning
- mass spectrometry
- phosphoproteomics
- + 1
- Jupyter Notebook
- Python
- Shell
Allelic Variation Explorer
If you are studying how single nucleotide polymorphisms are clustered in genomic samples, then the Allelic Variation Explorer can help you visualize them.
- Visualization
- Python
- Dockerfile
- AngelScript
AMUSE
Combine existing numerical codes in an easy to use Python framework. With AMUSE you can simulate objects such as star clusters, proto-planetary disks and galaxies.
- High performance computing
- Multi-scale & multi model simulations
- Workflow technologies
- C
- Fortran
- Python
- + 23
ANNUBeS
ANNUBeS is a deep learning framework meant to generate synthetic data and train on them neural networks aimed at developing and evaluating animals' training protocols in neuroscience.
- neural networks
- Neuroscience
- Python
APE
A CLI, Java API and RESTful API for the automated generation of computational pipelines (scientific workflows) from large collections of computational tools.
- Java
- Program synthesis
- Workflow technologies
- Java
- Common Workflow Language
- ANTLR
Arena-Crowds
Arena-Crowds is Python scripts for the data analysis to estimate crowd density based on WiFi positioning.
- Computer networks
- Networks
- Network Science
- Jupyter Notebook
- Python
ARISE biocloud
The Biocloud is the underlying digital back-end infrastructure of the ARISE program.