Ctrl K

KNIME PLANTS

A node for the KNIME workflow system that allows you to use the PLANTS protein-ligand docking algorithm.

34
mentions
1
contributor

Cite this software

DOI:

10.5281/zenodo.997272

Description

  • For cheminformaticians who want to combine protein-ligand docking with other KNIME workflow steps
  • Makes it possible to generate a PLANTS config file, run the PLANTS executable and ingest the PLANTS output from a KNIME workflow
  • The KNIME nodes come bundled with a PLANTS executable, so it does not have to be installed by each user separately
  • Used in workflows to perform an all-versus-all docking of all ligand-protein complexes of the Kinase and GPRC family in the protein data bank
Logo of KNIME PLANTS
Keywords
Workflow technologies
Programming languages
License
</>Source code

Participating organisations

Netherlands eScience Center
Vrije Universiteit Amsterdam
Radboud University Nijmegen
Natural Sciences & Engineering
Natural Sciences & Engineering
Life Sciences
Life Sciences

Reference papers

Mentions

Contributors

Contact person

Stefan Verhoeven
Stefan Verhoeven

Related projects

3D-e-Chem

Efficient exploitation of the massive amount of modern-day life science data

Updated 31 months ago
Finished