All software
Beyond the book
Measure the number of contributions to Wikipedia entries from individuals from different counties as a measure of cultural bias.
- Text analysis & natural language processing
- CSS
- HTML
- JavaScript
- + 2
chimp-classifier
The Python package `junglesounds` is a machine learning pipeline for classifying bioacoustic data using machine learning. The pipeline is reusable for other settings and species or vocalization types as long as a certain amount of labeled data has been collected.
- audio
- Audio processing
- bioacoustics
- + 2
- Jupyter Notebook
- Python
- Shell
Emma
Emma is a project to create a platform for development of application for Spark and DockerSwarm clusters.
- Big data
- Python
- R
- Scala
- + 1
Entangled
Entangled makes literate programming easier. It keeps markdown and program source in sync. This makes it more convenient to extend and debug your literate code.
- Literate Programming
- open science
- python
- + 2
- C
- C++
- Jinja
- + 3
eOSSR
The eOSSR is the Python library to programmatically manage the ESCAPE OSSR.
- jupyter-notebook
- repository
- research software
- + 2
- Dockerfile
- Python
Introduction to Geospatial Raster and Vector Data with Python
This lesson material shows how practical geospatial data analysis tasks can be carried out using Python
- Data Analysis
- geospatial
- Image processing
- + 4
iReceptor Gateway
A Distributed Data Management System and Scientific Gateway for Mining Next Generation Sequence Data from Immune Responses.
- immunogenomics
- Immunology
- iReceptor
- Blade
- Dockerfile
- HTML
- + 7
Lilio
A Python package for generating calendars to resample timeseries into training and target data for machine learning. Named after the inventor of the Gregorian Calendar.
- AI
- Preprocessing
- S2S
- Python
- Shell
NEBULA
The NEBULA (Nuxt & eScience Based Universal Learning Application) framework can be used to create an easily maintainable, version-controllable, web-based lesson collection. It uses Nuxt.js and Vue.js.
- teaching
- web
- JavaScript
- SCSS
- TypeScript
- + 1
protein-quest
Python package to search/retrieve/filter proteins and protein structures
- Python
PyChelator
PyChelator is a Python-based Colab and web application for metal chelator calculations, taking into account pH, temperature, and ionic strength. The build-in constants can be used for EGTA and ATP as chelators, together with Calcium and Magnesium as metals. User-defined constants can be used.
- application
- calcium
- chelator
- + 7
- CSS
- HTML
- JavaScript
- + 2
s2spy
A high-level python package integrating expert knowledge and artificial intelligence to boost sub-seasonal to seasonal (S2S) forecasting.
- AI
- S2S
- Python
- Shell