All software
Ersilia Model Hub
The Ersilia Model Hub is an open source platform to serve AI/ML models for infectious disease drug discovery.
- AI
- Chemistry
- Drug discovery
- + 1
- Python
- Jupyter Notebook
- Dockerfile
- + 1
hyphe
A research-driven web-crawler aimed at building, curating and categorizing a corpus of web actors and the network graph of hyperlinks connecting them.
- crawling
- Networks
- python
- + 1
- JavaScript
- Python
- HTML
- + 3
fsbrain
The fsbrain package provides visualization of neuroimaging data in R. The plots produced by fsbrain can be integrated into R notebooks or written to high-quality bitmap image files, ready for publication.
- Computational Neuroscience
- Visualization
- R
- Dockerfile
- Shell
Research Software Directory
A content management system for research software, which promotes the visibility, reuse, and impact of research software.
- FAIR
- Research Software Impact
- Software Citation
- TypeScript
- Java
- PLpgSQL
- + 7
4CAT Capture & Analysis Toolkit
The 4CAT Capture and Analysis Toolkit provides modular data capture & analysis for a variety of social media platforms. Its goal is to make the capture and analysis of data from these platforms accessible to people through a web interface, without requiring any programming or web scraping skills.
- Big data
- python
- Social media
- + 1
- Python
- JavaScript
- HTML
- + 4
AHN2 pointcloud viewer
A web application able to visualize the AHN2 point cloud data of the Netherlands.
- Big data
- Real time data analysis
- Visualization
- JavaScript
- HTML
- CSS
- + 1
BIAS
A toolbox for detecting structural bias in continuous optimization heuristics.
- Bias
- Metaheuristics
- optimization
- + 1
- Jupyter Notebook
- Python
- Dockerfile
- + 1
Inseq
Interpretability for sequence generation models 🐛 🔍
- deep learning
- Explainable AI
- generative models
- + 2
- Python
- Makefile
- Dockerfile
MUSCLE3
MUSCLE3 is a coupling library for building multiscale simulations out of single-scale models.
- High performance computing
- Multi-scale & multi model simulations
- Fortran
- C++
- Python
- + 4
DeepRank2
DeepRank2 is an open-source deep learning framework for data mining of protein-protein interfaces or single-residue missense variants. This package is an improved and unified version of three previously developed packages: DeepRank, DeepRank-GNN and DeepRank-Mut.
- Cancer vaccine
- Convolutional Neural Network
- Deep Learning Framework
- + 5
- Python
- Jupyter Notebook
- TeX
- + 1
pbg-ld
Access integrated data on genes and associated traits in plants
- Data Analysis
- genomics
- Inter-operability & linked data
- PLpgSQL
- Shell
- Python
- + 2
argopy
Argopy is a python library dedicated to Argo data access, manipulation and visualisation for standard users as well as Argo experts.
- Data Analysis
- Data processing
- Earth and Environmental Sciences
- + 3
- Python
- CSS
- Shell
- + 1