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157-168 of 340

Aiida-CHAMP

The aiida-champ plugin to handle the CHAMP workflow using AiiDA.

python
workflow

Python
Shell

aiproteomics

Generate and compare deep learning models for generating synthetic mass spectral libraries

Machine learning
mass spectrometry
phosphoproteomics
+ 1

Jupyter Notebook
Python
Shell

Allelic Variation Explorer

If you are studying how single nucleotide polymorphisms are clustered in genomic samples, then the Allelic Variation Explorer can help you visualize them.

Visualization

Python
Dockerfile
AngelScript

ANNUBeS

ANNUBeS is a deep learning framework meant to generate synthetic data and train on them neural networks aimed at developing and evaluating animals' training protocols in neuroscience.

neural networks
Neuroscience

Python

Arctic Web Map

Arctic Web Map (AWM) is an Arctic-specific web mapping tool allowing researchers to customize map projections for scientifically accurate visualization and analysis, a function that is critical for arctic research but missing in existing web mapping platforms.

data collection
python
wildlife

Python
JavaScript
CSS
+ 1

asreview-simulation

Command line interface to simulate an ASReview analysis using a variety of prior sampling strategies, classifiers, feature extractors, queriers, balancers, and stopping rules, all of which can be configured to run with custom parameterizations.

AI
ASReview
Automated Systematic Review
+ 4

Python

haddock3-webapp

Web app to build haddock3 configuration and run it.

TypeScript
CSS
JavaScript
+ 2

i-VRESSE bartender

Bartender is a middleware web service to schedule jobs on various infrastructures.

Workflow technologies

Python
Dockerfile
Mako

BIOMERO

a scalable and extensible image analysis framework

biaflows
bioimaging
biomero
+ 9

Python
Shell
Dockerfile

bird-cloud-gnn

bird-cloud-gnn is a Python package that helps generate a graph representation from point cloud data and fits graph neural networks for classification problem

Classification
Graph Neural Network
Machine learning
+ 2

Python

boatswain

Boatswain is a simple build system for docker images. It is especially useful when you have multiple docker images that depend on each other.

containers
docker

Python
Dockerfile

c3s-magic-wps

Web Processing Service for Climate Data Analysis in the MAGIC project.

Python
Makefile
Shell
+ 1