All software
APE
A CLI, Java API and RESTful API for the automated generation of computational pipelines (scientific workflows) from large collections of computational tools.
- Java
- Program synthesis
- Workflow technologies
- (ANTLR)
- ("Common Workflow Language")
- (Java)
DeepRank2
DeepRank2 is an open-source deep learning framework for data mining of protein-protein interfaces or single-residue missense variants. This package is an improved and unified version of three previously developed packages: DeepRank, DeepRank-GNN and DeepRank-Mut.
- Cancer vaccine
- Convolutional Neural Network
- Deep Learning Framework
- + 5
- (Dockerfile)
- ("Jupyter Notebook")
- (Python)
- + 1
LinkAhead
Open Source Research Data Management Software
- Data
- Electronic Lab Notebook
- ETL
- + 9
- (ANTLR)
- (C++)
- (CSS)
- + 9
PyBanshee, Python-based open source of the MATLAB toolbox BANSHEE.
PyBanshee, Python-based open source of the MATLAB toolbox BANSHEE.
- Bayesian network models
- Gaussian copula
- Python package
Measurements.jl
Error propagation calculator and library for physical measurements. It supports real and complex numbers with uncertainty, arbitrary precision calculations, operations with arrays, and numerical integration.
- error propagation
- Julia Package
- Physics
- + 1
- (Julia)
Code underlying the publication: Forecasting estuarine salt intrusion in the Rhine-Meuse delta using an LSTM model
Code underlying the publication: Forecasting estuarine salt intrusion in the Rhine-Meuse delta using an LSTM model
- chloride
- Delta
- estuary
- + 7
mpcrl-greenhouse
Software underlying publication: Reinforcement learning-based model predictive control for greenhouse climate control
- Agriculture
- Greenhouse climate control
- Model predictive control
- + 1
- (Markdown)
- (Other)
- (Python)
Cross-Domain Classification of Moral Values - code
Cross-Domain Classification of Moral Values - code
- Cross-domain
- Ethics
- Morality
- + 3
- (Markdown)
- (Other)
- (Python)
Arena-Crowds
Arena-Crowds is Python scripts for the data analysis to estimate crowd density based on WiFi positioning.
- Computer networks
- Networks
- Network Science
- ("Jupyter Notebook")
- (Python)
DIANNA
Deep Insight And Neural Network Analysis, DIANNA is the only Explainable AI, XAI library for scientists supporting Open Neural Network Exchange, ONNX - the de facto standard models format.
- Explainable AI
- Image processing
- Machine learning
- + 2
- ("Jupyter Notebook")
- (Python)
- (TeX)
CIRRUS-HL-campaign-codes---Code-accompanying-dissertation
CIRRUS-HL campaign codes - Codes accompanying dissertation
- Airborne measurements
- Background aerosol
- Backward trajectories
- + 7
- ("Jupyter Notebook")
- (Markdown)
- (Python)
- + 1
Code supporting the publication: Gromit: Benchmarking the performance and scalability of blockchain systems
Code supporting the publication: Gromit: Benchmarking the performance and scalability of blockchain systems
- Benchmarking
- Blockchain
- Performance
- + 1
- (JSON)
- (Markdown)
- (Other)
- + 3