Software | Research Software Directory

Research Software Directory

A content management system for research software, which promotes the visibility, reuse, and impact of research software.

FAIR
Research Software Impact
Software Citation

CSS
Dockerfile
Go
+ 9

26

41

sv-callers

Highly portable parallel workflow to detect structural variants in cancer genomes.

Big data
High performance computing
Workflow technologies

Python
Shell

4

41

talkr

{talkr} is an R package that offers a set of convenience functions for quality control, visualisation and analysis of conversational data. Most notably it provides a range of plotting functions that play well with ggplot and the tidyverse.

conversation
talk
turn-taking
+ 1

R
Rez

4

41

KNIME Silicos-it nodes

A node for the KNIME workflow systems that allows you to use the Silicos-it software to filter or align molecules.

Workflow technologies

Java

2

40

Code accompanying the paper "Modeling the effect of prior austenite grain size on bainite formation kinetics."

Bainite
Grain size
Nucleation
+ 2

3

40

Software accompanying manuscript "Annual Satellite-Based NDVI-Derived Land Cover of Europe for 2001-2019"

Classification trees
CORINE
Europe
+ 3

2

40

BIAS

A toolbox for detecting structural bias in continuous optimization heuristics.

Bias
Metaheuristics
optimization
+ 1

Dockerfile
Jupyter Notebook
Python
+ 1

3

40

KNIME node archetype

Want to write your own KNIME node Then use the KNIME node archetype to generate a node skeleton repository with sample code.

Workflow technologies

Java

1

40

KNIME GPCRdb nodes

A node for the KNIME workflow systems that allows you to retrieve data about your favorite G protein-coupled receptors from gpcrdb.org.

Workflow technologies

Java

2

40

KNIME node for Kripo

A node for the KNIME workflow systems that allows you to compare different binding sites in proteins with each other.

Workflow technologies

Java

1

40

KNIME Testflow

Allows you to test KNIME nodes automatically using JUnit.

Workflow technologies

Java

1

40

KNIME Pharmacophore

A plugin for the KNIME workflow system that adds a Pharmacophore data type and nodes to read, write, and align them.

Workflow technologies

Java

1

39