All software
Clustering Geo-data Cubes
Tool to perform cluster analysis of multi-dimensional geospatial data, running on local or distributed systems.
- Big data
- geospatial
- Machine learning
- + 1
- Python
- Jupyter Notebook
- TeX
pdb2sql
Fast and versatile Python package that leverages SQL queries to parse, manipulate and process biomolecular structure files. The structure files should be in the PDB format and are available on www.rcsb.org.
- Big data
- Optimized data handling
- Python
- TeX
- Makefile
recipy
Effortless provenance tracking in Python
- Inter-operability & linked data
- Optimized data handling
- Python
- HTML
- Jupyter Notebook
- + 2
WRFpy
WRFpy is a python application that provides an easy way to set up, run, and monitor Weather Research and Forecasting simulations
- Data Simulation
- python
- Python
ece2cmor3
Process EC-Earth output to publish for CMIP6
- Big data
- High performance computing
- Optimized data handling
- Shell
- Python
nlppln
A flexible solution to build text mining workflows that allows you to quickly combine Natural Language Processing tools from different sources.
- Text analysis & natural language processing
- Python
- Common Workflow Language
- Dockerfile
PuReGoMe
Analyzes social media messages for polarity and stance towards governmental COVID-19 measures
- Machine learning
- Social media
- Jupyter Notebook
- Python
- Shell
Turing Data Safe Haven
Data Safe Haven is an open-source framework for creating Trusted Research Environments (TREs) to analyse sensitive data. It provides a set of scripts that will allow you to deploy, administer and use your own TRE on Microsoft Azure cloud.
- Cloud
- cloud storage
- Infrastructure as code
- + 3
- Python
- Shell
- Jinja
- + 3
xtas
the eXtensible Text Analysis Suite
- Text analysis & natural language processing
- Python
- Shell
- Java
Learning_on_SCs
Code underlying: Hodge-Aware Convolutional Learning on Simplicial Complexes
- Hodge theorem
- neural networks
- simplicial complexes
- Other
- Python
- Markdown
- + 1
Microscopy data, code and analysis underlying the publication "Optical STEM detection for scanning electron microscopy"
Microscopy data, code and analysis underlying the publication "Optical STEM detection for scanning electron microscopy"
- Electron Detection
- Instrumentation Development
- Scanning Electron Microscopy
- + 2
- Other
- Markdown
- Jupyter Notebook
- + 2
eEcology Annotation Tool
Visualize and annotate GPS measurements of bird movements.
- Inter-operability & linked data
- Visualization
- HTML
- Python
- Mako
- + 5