All software
ZenodoCI
The library is intended to be part of a complete CI pipeline. This stage deploys to Zenodo the files found in the ./build directory, configured in the .gitlab-ci.yml file
- ESCAPE
- Dockerfile
- Python
- Shell
ewatercycle-wflowjl
Wflow.jl plugin for eWatercycle.
- Dockerfile
- Python
Folklore Clinical Variant Interpretation MCP
Folklore MCP 1.6.0: public variant evidence, gene resolution and profiles, ClinGen gene-disease associations and literature. 11 tools.
- ACMG/AMP
- bioinformatics
- clinical variant interpretation
- + 4
- Dockerfile
- JavaScript
- Jupyter Notebook
- + 2
Forecasting the grid emission factor for the Netherlands
A workflow to produce emission factor forecasts for the electricity mix of the Netherlands, up to 7 days ahead.
- electricity grid
- emission factor
- Forecasting
- + 1
- Dockerfile
- Python
grpc4bmi
Run, read and write model state of a numerical simulation written in a variety of languages remotely from Python
- Multi-scale & multi model simulations
- C++
- CMake
- Dockerfile
- + 5
Harmony
Making harmonisation simple. Social scientists often have to compare items from different questionnaires or datasets. Harmony is a tool that uses natural language processing and generative AI models to help researchers harmonise questionnaire items quickly, even in different languages.
- AI
- Data
- Data Science
- + 10
- Dockerfile
- Jupyter Notebook
- Python
hireburn
Dependency-free Python toolkit for AI-assisted hiring: avatar interview kit, human-pace outreach and funnel loss accounting. No network calls, MIT licence.
- AI disclosure
- AI interview
- EU AI Act
- + 3
- Dockerfile
- Python
iBridges
A wrapper around the python-irodsclient to allow for easy interaction with iRODS servers for research software engineers to integrate compute wokflows and data management.
- Data management
- iRODS
- Metadata Management
- + 1
- Dockerfile
- Jupyter Notebook
- Python
- + 2
Inciteful
Free literature discovery from the scholarly citation graph. Give it a few seed papers and it finds related work, the important papers and reviews around them, and the citation paths between papers. Built on OpenAlex; no account needed.
- CSS
- Dockerfile
- Fluent
- + 5
kunefe
A Python package that helps users run containerized applications on HPC systems
- Agent-based modeling
- Apptainer
- containers
- + 5
- Dockerfile
- Python
- Shell
Laserfarm
Laserfarm: Laserchicken Framework for Applications in Research in Macroecology. Leverage Laserchicken in distributed fashion to use continental scale point cloud datasets for research.
- Dockerfile
- Jupyter Notebook
- Python
leakybucket
A Python BMI leaky bucket model 🪣
- Dockerfile
- Jupyter Notebook
- Python