All software
Overture Score
Transfer data quickly and easily to and from any cloud-based storage system.
- Cancer Genomics
- Cloud Storage & Transfer
- Java
- Shell
- Makefile
- + 1
Overture Song
Quickly and reliably track genome metadata scattered across multiple Cloud storage systems.
- Cancer Genomics
- Metadata Management
- Metadata Validation
- Java
- Python
- Shell
- + 7
PanTools-pipeline-v4
General purpose Snakemake pipeline for PanTools v4.
- Data Analysis
- genomics
- pangenomics
- Python
- Dockerfile
- Shell
PlanEO Dashboard
Provides an interactive interface for visualizing geographical data relevant to the MINE-DD project, including pathogen distribution, risk factors, and demographic analysis through both point data and raster overlays.
- Data Analysis
- Demographic Analysis
- Geographic Visualization
- + 8
- TypeScript
- Svelte
- Python
- + 5
PyELSEPA
Python wrapper for ELSEPA, a numeric code for computing elastic scattering cross-sections for electrons and positrons off neutral atoms.
- Python
- Dockerfile
PyStemmusScope
A python package for running the STEMMUS-SCOPE model
- Jupyter Notebook
- Python
- Shell
- + 1
ReaxPro wrappers
This repository is a collection of wrappers used in the ReaxPro project. It holds wrappers for the Amsterdam Modeling Suite (AMS) and Zacros.
- Chemistry
- Multiscale modeling
- Multi-scale & multi model simulations
- Python
- Dockerfile
- Shell
Remote BMI
Remote BMI allows you to communicate with Basic Model Interface enabled numerical models using a RESTful API
- Basic Model Interface
- BMI
- julia
- + 4
- Julia
- Python
- R
- + 3
RESTful APE
RESTful API for the APE (Automated Pipeline Explorer) library.
- Java
- Program synthesis
- REST API
- + 1
- Java
- Dockerfile
ReSurfEMG
ReSurfEMG is an open source collaborative python library for analysis of respiratory electromyography (EMG). The library includes functions for pre-processing, analysis and machine learning.
- electrophysiology
- EMG
- Machine learning
- + 1
- Jupyter Notebook
- Python
- TeX
- + 3
RickView
Easy to deploy low-resource stand-alone RDF knowledge graph browser written in Rust. No SPARQL endpoint needed!
- Linked Data
- Linked Data Browser
- RDF
- + 2
- Rust
- HTML
- CSS
- + 1
ROOT
An open-source data analysis framework used by high energy physics and others.
- C++
- C
- JavaScript
- + 27