Software | Research Software Directory

LitStudy

Explore scientific literature using Python from the comfort of a Jupyter notebook

Inter-operability & linked data
Text analysis & natural language processing
Visualization

(HTML)
(Python)

7

42

Data and software supporting the publication "Telecom-band quantum interference of frequency-converted photons from remote detuned NV centers"

Quantum Frequency Conversion
quantum networks
Telecom wavelength
+ 1

4

41

Research Software Directory

A content management system for research software, which promotes the visibility, reuse, and impact of research software.

FAIR
Research Software Impact
Software Citation

(CSS)
(Dockerfile)
(Go)
+ 9

26

41

KNIME Silicos-it nodes

A node for the KNIME workflow systems that allows you to use the Silicos-it software to filter or align molecules.

Workflow technologies

(Java)

2

40

Supplementary materials for the article: Towards future pedestrian-vehicle interactions: Introducing theoretically-supported AR prototypes.

Augmented Reality
Automated vehicles
autonomous vehicles
+ 3

5

40

InstaNovo

InstaNovo is a transformer neural network with the ability to translate fragment ion peaks into the sequence of amino acids that make up the studied peptide(s). InstaNovo+ is a multinomial diffusion model that further improves performance by iterative refinement of predicted sequences.

deep learning
Machine learning
mass spectrometry
+ 1

(Makefile)
(Python)

5

40

KNIME node archetype

Want to write your own KNIME node Then use the KNIME node archetype to generate a node skeleton repository with sample code.

Workflow technologies

(Java)

1

40

KNIME GPCRdb nodes

A node for the KNIME workflow systems that allows you to retrieve data about your favorite G protein-coupled receptors from gpcrdb.org.

Workflow technologies

(Java)

2

40

KNIME node for Kripo

A node for the KNIME workflow systems that allows you to compare different binding sites in proteins with each other.

Workflow technologies

(Java)

1

40

KNIME Testflow

Allows you to test KNIME nodes automatically using JUnit.

Workflow technologies

(Java)

1

40

sv-callers

Highly portable parallel workflow to detect structural variants in cancer genomes.

Big data
High performance computing
Workflow technologies

(Python)
(Shell)

4

40

KNIME Pharmacophore

A plugin for the KNIME workflow system that adds a Pharmacophore data type and nodes to read, write, and align them.

Workflow technologies

(Java)

1

39