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Cover image for FastMLC

FastMLC

Detect clusters in for example large collections of DNA or protein sequences, and visualize the results in a web browser.

  • Big data
  • Machine learning
  • Visualization
  • C++
  • C
  • Makefile
  • + 5
5
11
Cover image for Cross-perspective Topic Modeling

Cross-perspective Topic Modeling

An application that uses cross-perspective topic modeling to extract topics and opinions from text and provides insight into how they change over time.

  • Text analysis & natural language processing
  • Python
  • Jupyter Notebook
  • Shell
3
10
Cover image for MDStudio

MDStudio

A tool to run molecular dynamics workflows.

  • High performance computing
  • Real time data analysis
  • Workflow technologies
  • Python
  • CSS
  • TypeScript
  • + 5
4
10
Cover image for MapReader

MapReader

MapReader is an end-to-end computer vision (CV) pipeline for exploring and analyzing images at scale.

  • computer vision
  • digital humanities
  • geospatial
  • + 4
  • Python
  • TeX
  • Dockerfile
  • + 1
7
9
Cover image for Xenon command line interface

Xenon command line interface

A command line interface for the Xenon library that allows you to use remote machines to do your computations.

  • High performance computing
  • Java
  • Common Workflow Language
  • Dockerfile
  • + 2
2
9
Cover image for ChemSpaX: A Python tool for local chemical space exploration

ChemSpaX: A Python tool for local chemical space exploration

ChemSpaX is a Python package that can be used for local chemical space exploration of any structure. This is done by placing substuents on a pre-defined skeleton. A substituent can be chosen from an existing library and can be attached to the skeleton.

  • catalysis
  • Chemistry
  • python
  • Python
  • Shell
3
8
Cover image for ece2cmor3

ece2cmor3

Process EC-Earth output to publish for CMIP6

  • Big data
  • High performance computing
  • Optimized data handling
  • Shell
  • Python
2
7
Cover image for Turing Data Safe Haven

Turing Data Safe Haven

Data Safe Haven is an open-source framework for creating Trusted Research Environments (TREs) to analyse sensitive data. It provides a set of scripts that will allow you to deploy, administer and use your own TRE on Microsoft Azure cloud.

  • Cloud
  • cloud storage
  • Infrastructure as code
  • + 3
  • Python
  • Shell
  • Jinja
  • + 3
29
7
Cover image for xtas

xtas

the eXtensible Text Analysis Suite

  • Text analysis & natural language processing
  • Python
  • Shell
  • Java
2
7
Cover image for PuReGoMe

PuReGoMe

Analyzes social media messages for polarity and stance towards governmental COVID-19 measures

  • Machine learning
  • Social media
  • Jupyter Notebook
  • Python
  • Shell
3
6
Cover image for 3D Slicer

3D Slicer

3D Slicer is a free, open source software for visualization, processing, segmentation, registration, and analysis of medical, biomedical, and other 3D images and meshes; and planning and navigating image-guided procedures.

  • 3D
  • 3DSlicer
  • Extension
  • + 7
  • C++
  • Python
  • CMake
  • + 5
4
5
Cover image for mexca

mexca

Capture emotion expressions from video, audio, and text with a single pipeline.

  • Audio processing
  • Image processing
  • Machine learning
  • + 1
  • Python
  • Dockerfile
  • Shell
5
5