All software
3D Slicer
3D Slicer is a free, open source software for visualization, processing, segmentation, registration, and analysis of medical, biomedical, and other 3D images and meshes; and planning and navigating image-guided procedures.
- 3D
- 3DSlicer
- Extension
- + 7
- C++
- Python
- CMake
- + 5
eEecology Classification
Automatic classification of accelerometer data using a supervised learning approach.
- Machine learning
- Java
- JavaScript
- HTML
- + 3
PIQMIe
A web tool for mass spectrometry-based proteomics data analyses
- Data Analysis
- mass spectrometry
- Optimized data handling
- + 2
- HTML
- JavaScript
- Python
- + 3
cffconvert
Command line tool to convert CITATION.cff files to various formats used by reference managers such as Zotero and JabRef.
- Python
- TeX
- HTML
- + 1
cffinit
A web form to initialize CITATION.cff files which you can use to include citation information into your software repository.
- Software Citation
- TypeScript
- Vue
- JavaScript
- + 3
evidence
doc2vec-based assisted close reading with support for abstract concept-based search and context-based search
- Text analysis & natural language processing
- TypeScript
- Go
- Jupyter Notebook
- + 5
howfairis
Command line tool to analyze a git repository's compliance with the fair-software.eu recommendations.
- HTML
- Python
- Shell
- + 1
Noodles
Task-based parallel programming model in Python that offers the same intuitive interface when running complex workflows on your laptop or on large computer clusters.
- High performance computing
- Workflow technologies
- Jupyter Notebook
- Python
- Shell
- + 2
PanVA
Variant Analysis within Pangenomes.
- API
- Data Analysis
- pangenomics
- Vue
- TypeScript
- Python
- + 6
endogenous-macrodynamics-in-algorithmic-recourse
Software and data underlying the publication: Endogenous Macrodynamics in Algorithmic Recourse
- Algorithmic Recourse
- Counterfactual Explanations
- Dynamic Systems
- + 1
- Other
- HTML
- JSON
- + 8
Beyond the book
Measure the number of contributions to Wikipedia entries from individuals from different counties as a measure of cultural bias.
- Text analysis & natural language processing
- Jupyter Notebook
- Python
- JavaScript
- + 2
iReceptor Gateway
A Distributed Data Management System and Scientific Gateway for Mining Next Generation Sequence Data from Immune Responses.
- immunogenomics
- Immunology
- iReceptor
- PHP
- Shell
- Blade
- + 7