All software
LORIS
Longitudinal Online Research and Imaging System (LORIS) is a web-based data and project management software for neuroimaging research studies. It is an OPEN SOURCE framework for storing and processing behavioural, clinical, neuroimaging and genetic data.
- Computational Neuroscience
- database
- neuroimaging
- + 3
- (CSS)
- (GLSL)
- ("Go Template")
- + 10
Mahiru
A prototype for a federated, distributed data sharing and processing system.
- Data processing
- Data Sharing
- Policies
- + 1
- (C)
- (Dockerfile)
- (Makefile)
- + 2
Massive PotreeConverter
Use parallel processing to quickly convert large point cloud data sets to the format used by the Potree viewer.
- Big data
- Optimized data handling
- (Python)
Mass Spec Studio
A user-friendly, fully extensible framework for mass spectrometry analysis.
- mass spectrometry
- proteins
MMSODA Toolbox for MATLAB
MATLAB toolbox for global optimization and state estimation of dynamic models using distributed computing.
- (Batchfile)
- (C)
- (CSS)
- + 5
Motus Wildlife Tracking System
The Motus Wildlife Tracking System (Motus) is an international collaborative research network that uses coordinated automated radio telemetry to facilitate research and education on the ecology and conservation of migratory animals.
- conservation science
- movement ecology
- wildlife tracking
- (R)
mzRecal
mzRecal recalibrates mass spectrometry (MS1) data in mzML format, using peptide identifications in mzIdentML.
- mass spectrometry
- proteomics
- (Dockerfile)
- (Go)
- (Makefile)
- + 2
NPLinker
Microbial natural products data mining by integrating genomics and metabolomics data
- Data processing
- multi-omics integration
- (Makefile)
- (Mustache)
- (Python)
- + 2
Open Computational Multiphysics
OpenCMP is a computational multiphysics software package based on the finite element method
- Computational Fluid Dynamics (CFD)
- computational Multiphysics
- diffuse interface method
- + 3
- (Python)
- (TeX)
OpenMS
OpenMS is an open-source software C++ library for LC-MS data management and analyses. It offers an infrastructure for rapid development of mass spectrometry related software. OpenMS is free software available under the three clause BSD license and runs under Windows, macOS, and Linux.
- C++
- mass spectrometry
- metabolomics
- + 1
- (Batchfile)
- (C)
- (C++)
- + 15
OpenPNM
OpenPNM is an open source project aiming to provide porous media researchers with a ready-made framework for performing a wide range of pore network simulations.
- Pore network modeling
- (Makefile)
- (Python)
openPSTD
openPSTD is a Python-based research software that allows efficient and detailed calculation of sound propagation in a 2D built environment. It is especially useful as a reference tool for other developed software on acoustic sound propagation.
- Acoustics
- GPU
- python
- (C)
- (C++)
- (CMake)
- + 3