All software
Arctic Web Map
Arctic Web Map (AWM) is an Arctic-specific web mapping tool allowing researchers to customize map projections for scientifically accurate visualization and analysis, a function that is critical for arctic research but missing in existing web mapping platforms.
- data collection
- python
- wildlife
- CSS
- JavaScript
- Python
- + 1
ARISE biocloud
The Biocloud is the underlying digital back-end infrastructure of the ARISE program.
- Go Template
- HCL
- Jinja
- + 2
asreview-simulation
Command line interface to simulate an ASReview analysis using a variety of prior sampling strategies, classifiers, feature extractors, queriers, balancers, and stopping rules, all of which can be configured to run with custom parameterizations.
- AI
- ASReview
- Automated Systematic Review
- + 4
- Python
auto-doc-engine
AST-driven research-document compiler for typed Markdown, structural-change evidence, diagnostics, artifact records and lineage, SARIF interchange, multi-format synchronization, and RO-Crate packaging
- ast
- markdown
- Provenance
- + 4
- Jinja
- Makefile
- Python
Axiom-0
Dependency-free Python reference implementation for explicit data contracts, canonicalization, measurable state transitions, KL-divergence checks, validation, and reproducible repository boundaries
- canonical json
- data contracts
- Reproducibility
- + 3
- CSS
- HTML
- JavaScript
- + 3
haddock3-webapp
Web app to build haddock3 configuration and run it.
- CSS
- Dockerfile
- JavaScript
- + 2
i-VRESSE bartender
Bartender is a middleware web service to schedule jobs on various infrastructures.
- Workflow technologies
- Dockerfile
- Mako
- Python
BGC Viewer
A viewer for biosynthetic gene cluster data.
- bioinformatics
- Gene Clusters
- natural products
- + 1
- CSS
- Dockerfile
- HTML
- + 6
bibr
bibliography rodent 🦫 - a modern scientific extraction pipeline.
- Jinja
- Jupyter Notebook
- Python
- + 2
BIOMERO
a scalable and extensible image analysis framework
- biaflows
- bioimaging
- biomero
- + 9
- Dockerfile
- Python
- Shell
bird-cloud-gnn
bird-cloud-gnn is a Python package that helps generate a graph representation from point cloud data and fits graph neural networks for classification problem
- Classification
- Graph Neural Network
- Machine learning
- + 2
- Python
boatswain
Boatswain is a simple build system for docker images. It is especially useful when you have multiple docker images that depend on each other.
- containers
- docker
- Dockerfile
- Python