All software
DeepRank GNN
DeepRank-GNN is the graph neural network of our DeepRank package. DeepRank GNN allows to train graph neural networks to classify protein-protein interface
- Machine learning
- Protein-Protein Interaction
- Python
OpenLB
OpenLB is a C++ package for the implementation of lattice Boltzmann methods (LBM) to address a vast range of transport problems, e.g. in computational fluid dynamics. The modular open source code enables fast implementation of academic test problems and advanced engineering applications.
- Computational Fluid Dynamics
- High Performance Computation
- Lattice Boltzmann Methods
- + 4
- C
- C++
- Makefile
- + 2
GNU Astronomy Utilities (Gnuastro)
GNU Astronomy Utilities (Gnuastro) is an official GNU package consisting of various programs and library functions for the manipulation and analysis of (astronomical) data. All the programs share the same basic command-line user interface based on the GNU coding standards.
- astronomy
- Data Analysis
- Image processing
- + 4
- C
- C++
- M4
- + 3
ESMValCore
ESMValTool Core: core functionalities and driver for ESMValTool, a community diagnostic and performance metrics tool for routine evaluation of Earth System Models in CMIP.
- Big data
- Optimized data handling
- Visualization
- + 1
- Dockerfile
- HTML
- JavaScript
- + 4
HEAST
Hybrid Electric Aircraft Sizing Tool (HEAST)
- Conceptual aircraft design
- Distributed propulsion
- Hybrid electric propulsion
- + 1
- Markdown
- Matlab
- Other
Kernel Tuner
Kernel Tuner greatly simplifies the development of highly-optimized and auto-tuned CUDA, OpenCL, and C code, supporting many advanced use-cases and optimization strategies that speed up the auto-tuning process.
- Big data
- GPU
- High performance computing
- + 3
- Cuda
- Julia
- Python
matchms
Python library for fuzzy comparison of mass spectrum data and other Python objects
- Big data
- Optimized data handling
- Batchfile
- Makefile
- Python
- + 1
FAIR Data Point
RESTful web service that enables data owners to expose their data sets using rich machine-readable metadata.
- Big data
- Inter-operability & linked data
- Dockerfile
- Makefile
- Python
ArrayAnalysis
ArrayAnalysis provides a user-friendly solution for transcriptomic data analysis. It allows researchers, regardless of their bioinformatics expertise, to efficiently analyse, explore, and interpret RNA sequencing and microarray datasets.
- Data Analysis
- data visualization
- microarray
- + 2
- Batchfile
- HTML
- Inno Setup
- + 2
Code and data underlying the publication: City3D: Large-scale Building Reconstruction from Airborne LiDAR Point Clouds
Code and data underlying the publication: City3D: Large-scale Building Reconstruction from Airborne LiDAR Point Clouds
- Building
- Point Cloud
- Surface-reconstruction
- + 1
- Automake
- C
- C++
- + 8
splithalfr
Estimates split-half reliabilities for scoring algorithms of cognitive tasks and questionnaires.
- Cognitive tasks
- Confounding effects
- Non-linear scoring algorithms
- + 1
- R
DeepRank
Deep learning framework for data mining protein-protein interactions using CNN
- Big data
- Machine learning
- Optimized data handling
- C
- Makefile
- Python
- + 2