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MAGMa

MAGMa is an online application for the automatic chemical annotation of mass spectrometry data.

83
mentions
3
contributors

Cite this software

What MAGMa can do for you

  • Supports mass spectrometrists to chemically annotate fragmentation data
  • Retrieves and ranks candidate molecules and substructures for parent and product ions
  • Provides metabolic reaction rules to generate candidate molecules
  • Provides a powerful user interface to interpret the results
Logo of MAGMa
Keywords
Programming languages
  • Python 59%
  • JavaScript 31%
  • Makefile 6%
  • HTML 3%
  • Cython 1%
License
</>Source code

Participating organisations

Life Sciences
Life Sciences
Netherlands eScience Center
Netherlands Metabolomics Institute
Wageningen University & Research

Reference papers

Mentions

Testimonials

My group has had an excellent run of almost 1 year now running MAGMa as part of our cluster-based compound ID workflow - it is really a great program.
Lee Ferguson, Department of Civil & Environmental Engineering, Duke University

Contributors

Lars Ridder
Lars Ridder
MS
Marijn Sanders
Netherlands eScience Center

Related projects

Chemical Informatics for Metabolite Identification and Biochemical Network Reconstruction

Chemical informatics for metabolite identification and biochemical network reconstruction

Updated 15 months ago
Finished