All software
PyChelator
PyChelator is a Python-based Colab and web application for metal chelator calculations, taking into account pH, temperature, and ionic strength. The build-in constants can be used for EGTA and ATP as chelators, together with Calcium and Magnesium as metals. User-defined constants can be used.
- application
- calcium
- chelator
- + 7
- (CSS)
- (HTML)
- (JavaScript)
- + 2
s2spy
A high-level python package integrating expert knowledge and artificial intelligence to boost sub-seasonal to seasonal (S2S) forecasting.
- AI
- S2S
- (Python)
- (Shell)
SalientDetector-matlab
If you want to automate object detection or image photo-identification tasks in an easy way with open MATLAB software, the SalientDetector-MATLAB is right for you
- Image processing
- (MATLAB)
SalientDetector-python
If you want to automate your object detection or photo-identification image tasks in an easy way with free open-source software, the SalientDetector-Python is the tool for you
- Image processing
- ("Jupyter Notebook")
- (Makefile)
- (Python)
SedTRAILS
SedTRAILS is a Lagrangian particle-tracking model for simulating and visualizing coastal sediment pathways and connectivity. Initial public release forthcoming ~February 2026.
- Coastal Engineering
- coastal processes
- connectivity
- + 5
- (Python)
SlicerRT
SlicerRT allows users to analyze spatio-temporal accumulation of the therapeutic dosage (radiation, thermal, etc.). Tools include dose visualization, quantitative metrics computation, comparison, and import/export to DICOM format.
- (C)
- (C++)
- (CMake)
- + 1
Revisited Via Appia
Create visual storylines that involve media like images and videos embedded in a 3D environment with efficient Pointcloud data directly from the web browser.
- cultural heritage
- Digital Twins
- gis
- + 2
- (CSS)
- (HTML)
- (JavaScript)
- + 3
Importing a Roman Transport network
Use open Roman datasets via and import them into a NetLogo model, using the ORBIS dataset (http://orbis.stanford.edu/) to create a set of Roman settlements and major routes between them.
Out of Africa - Conditional isotropic diffusion
A reimplementation of the classical study by Young and Bettinger (1992) investigating the possible drivers behind the Out of Africa dispersal of modern humans.
Landscape and Land Cover Generation
This algorithm generates landscapes and landcovers in contiguous zones. Users can define different landscape types, landcovers and rules for settlement placement in the setup procedure. It is designed to allow flexible configuration of environmental and social parameters.
SyGMa
SyGMa provides fast and lightweight predictions of human metabolites to support discovery scientists design better and safer drugs
- Workflow technologies
- (Python)
agda-core
Code underlying the publication: Building a Correct-By-Construction Type Checker for a Dependently Typed Core Language
- core language
- Dependent Types
- type-checking
- + 2
- (Haskell)
- (Markdown)
- (Other)
- + 1