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nanomesh

Python workflow tool for generating meshes from 2D and 3D microscopy image data

4
mentions
3
contributors

Cite this software

DOI:

10.5281/zenodo.6325409

Description

  • Segment and mesh 2D or 3D image data
  • Mesh visualization
  • Easy-to-use Python API
  • Calculate cell metrics
  • Export to many mesh formats

Python workflow tool for generating meshes from 2D and 3D microscopy image data. It has an easy-to-use API that can help process and segment image data, generate quality meshes, and write the data to many mesh formats. Nanomesh also contains tools to inspect and visualize the meshes, and generate cell quality metrics.

Keywords
Image processing
Visualization
Workflow technologies
Programming language
License
</>Source code

Participating organisations

Natural Sciences & Engineering
Natural Sciences & Engineering
University of Twente
Netherlands eScience Center

Reference papers

Mentions

Contributors

Contact person

Stef Smeets
LCvW
Lars Corbijn van Willenswaard
Nicolas Renaud

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