nanomesh

Python workflow tool for generating meshes from 2D and 3D microscopy image data

3
contributors

Cite this software

What nanomesh can do for you

  • Segment and mesh 2D or 3D image data
  • Mesh visualization
  • Easy-to-use Python API
  • Calculate cell metrics
  • Export to many mesh formats

Python workflow tool for generating meshes from 2D and 3D microscopy image data. It has an easy-to-use API that can help process and segment image data, generate quality meshes, and write the data to many mesh formats. Nanomesh also contains tools to inspect and visualize the meshes, and generate cell quality metrics.

Keywords
Programming language
  • Jupyter Notebook 100%
License
</>Source code

Participating organisations

Netherlands eScience Center

Contributors

Contact person

Stef Smeets

Stef Smeets

Netherlands eScience Center
Mail Stef
LCvW
Lars Corbijn van Willenswaard
University of Twente
Nicolas Renaud
Nicolas Renaud
Netherlands eScience Center
Stef Smeets
Stef Smeets
Netherlands eScience Center

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Updated 19 months ago
Finished