Skip to main content
Ctrl K

All software

742 software items. Page 24 of 62. 12 items per page. 1 filters active.
277-288 of 742

PhenoTips

PhenoTips is a software tool that makes it easy for clinicians and researchers to draw pedigrees and collect structured phenotype data for patients with genetic disorders.

  • API
  • deep phenotyping
  • genogram
  • + 6
  • Batchfile
  • CSS
  • HTML
  • + 4
2
1

PoreSpy

PoreSpy is a collection of image analysis tools used to extract information from 3D images of porous materials (typically obtained from X-ray tomography).

  • image analysis
  • porous media
  • tomography
  • Batchfile
  • Python
  • Shell
2
1

protein-mosaic-q

Open-source research software for quantifying amino-acid clustering in protein structures, developed alongside simulation-based analyses of structural patterns.

  • bioinformatics
  • Citizen Science
  • proteins
  • + 1
  • Python
2
1

qumia-train-scripts

Scripts and files related to ML training for the QUMIA project

  • Machine learning
  • Neuromuscular
  • ultrasound imaging
  • Jupyter Notebook
  • Python
  • Shell
3
1

ROBIST

Robust Optimization by Iterative Scenario Sampling and Statistical Testing

  • optimization
  • python
  • Python
2
1

Rocket

Rocket is a framework for efficient execution of all-pair applications on heterogeneous platforms.

  • Big data
  • GPU
  • High performance computing
  • + 1
  • C++
  • Cuda
  • Java
  • + 2
1
1

rocrate-action-recorder

Python package to record calls of Python CLI commands into a Research Object Crate (RO-Crate). Supports RO-Crate 1.1 specification. Specifically the Process Run Crate profile.

  • Inter-operability & linked data
  • Workflow technologies
  • Python
1
1

SARXarray

An Xarray extension to process coregistered Single Look Complex (SLC) image stacks acquired by Synthetic Aperture Radar (SAR).

  • Dask
  • InSAR
  • Interferometry
  • + 6
  • Python
  • ReScript
  • TeX
4
1

scriptcwl

Create CWL workflows by writing a simple Python script.

  • CWL
  • Workflow technologies
  • Common Workflow Language
  • Python
8
1

SimVascular

The only fully open source software package providing a complete pipeline from medical image data segmentation to patient specific blood flow simulation and analysis.

  • Cardiovascular
  • Fluid mechanics
  • Medical image computing
  • + 1
  • Batchfile
  • C
  • C++
  • + 9
4
1

sirup

Sirup is an open-source Python package that makes it easy to connect to, and rotate across, VPN servers provided by services such as ProtonVPN and Surfshark.

  • ip-rotation
  • openvpn
  • python
  • + 1
  • Python
  • Shell
1
1

SlicerIGT

Software toolkit for rapid development of image-guided therapy systems - for minimally invasive medical procedures, where operators rely on computer-generated images rather than direct sight of the target organs.

  • 3D Slicer
  • deep learning
  • Medical image computing
  • + 2
  • C++
  • CMake
  • Python
2
1