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119 software items. Page 2 of 10. 12 items per page. 1 filters active.
13-24 of 119

DeepRank

Deep learning framework for data mining protein-protein interactions using CNN

  • Big data
  • Machine learning
  • Optimized data handling
  • C
  • Makefile
  • Python
  • + 2
8
140

powerfit

Rigid body fitting of atomic strucures in cryo-electron microscopy density maps

  • cryo-electron microscopy
  • macromolecular structure
  • map fitting
  • C
  • Cuda
  • Dockerfile
  • + 3
6
72

HyperCanny

Finds edges in high-dimensional data using the Canny algorithm.

  • Data Analysis
  • edge detection
  • High performance computing
  • C
  • C++
  • Makefile
  • + 3
1
35

MUSCLE3

MUSCLE3 is a coupling library for building multiscale simulations out of single-scale models.

  • High performance computing
  • Multi-scale & multi model simulations
  • C
  • C++
  • Dockerfile
  • + 4
4
27

OMUSE

A Python environment to interface and couple oceanographic and other earth system model codes.

  • High performance computing
  • Multi-scale & multi model simulations
  • Batchfile
  • C
  • C++
  • + 10
8
27

Code to incorporate entrapped air pocket dynamics into SWMM (AirSWMM2.0)

Code to incorporate entrapped air pocket dynamics into SWMM (AirSWMM2.0)

  • Air pocket dynamics
  • Intermittent water supply
  • Pipe-filling events
  • + 1
  • C
  • Markdown
  • Other
4
19

AirSWMMv1.0

Code to incorporate entrapped air behaviour into SWMM (AirSWMM1.0)

  • Air–water interface interaction
  • Intermittent water supply
  • Stormwater management model (SWMM)
  • + 1
  • C
  • Other
4
17

DALES

DALES is a large-eddy simulation code designed for studies of the physics of the atmospheric boundary layer, including convective and stable boundary layers as well as cloudy boundary layers.

  • C
  • CMake
  • Fortran
  • + 8
24
11

ExploreASL

ExploreASL is a pipeline and toolbox for image processing and statistics of arterial spin labeling perfusion MR images. It is designed as a multi-OS, open-source, collaborative framework that facilitates cross-pollination between image processing method developers and clinical investigators.

  • ASL
  • Image processing
  • MRI
  • C
  • MATLAB
  • Python
7
11

FastMLC

Detect clusters in for example large collections of DNA or protein sequences, and visualize the results in a web browser.

  • Big data
  • Machine learning
  • Visualization
  • C
  • C++
  • CMake
  • + 5
5
11

Code and data underlying the publication: Symmetrization of 2D Polygonal Shapes Using Mixed-Integer Programming

Code and data underlying the publication: Symmetrization of 2D Polygonal Shapes Using Mixed-Integer Programming

  • Design
  • Digitalization
  • Shape optimization
  • + 1
  • Automake
  • C
  • C++
  • + 3
3
9

Uncertainty Specification and Analysis for Thermosphere Observations

Uncertainty Specification and Analysis for Thermosphere Observations

  • Accelerometer
  • GNSS tracking
  • Mass density
  • + 2
  • C
  • C++
  • Fortran
  • + 3
1
9