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Cover image for PyChelator

PyChelator

PyChelator is a Python-based Colab and web application for metal chelator calculations, taking into account pH, temperature, and ionic strength. The build-in constants can be used for EGTA and ATP as chelators, together with Calcium and Magnesium as metals. User-defined constants can be used.

  • application
  • calcium
  • chelator
  • + 7
  • Jupyter Notebook
  • JavaScript
  • HTML
  • + 2
3
1
Cover image for qumia-train-scripts

qumia-train-scripts

Scripts and files related to ML training for the QUMIA project

  • Machine learning
  • Neuromuscular
  • ultrasound imaging
  • Python
  • Shell
3
1
Cover image for ROBIST

ROBIST

Robust Optimization by Iterative Scenario Sampling and Statistical Testing

  • optimization
  • python
  • Python
2
1
Cover image for Rocket

Rocket

Rocket is a framework for efficient execution of all-pair applications on heterogeneous platforms.

  • Big data
  • GPU
  • High performance computing
  • + 1
  • Java
  • Cuda
  • C++
  • + 2
1
1
Cover image for Rucio deployment for KM3NeT

Rucio deployment for KM3NeT

This repository contains the Rucio deployment for KM3NeT. It can be used as an example of how to deploy Rucio.

  • Big data
  • High performance computing
    2
    1
    Cover image for SalientDescriptor-matlab

    SalientDescriptor-matlab

    If you need to automate your image matching tasks for the purposes of object detection or photo-identification in an easy way, the SalientDescriptor-matlab is right for you

    • Image processing
    • MATLAB
    • HTML
    1
    1
    Cover image for sarxarray

    sarxarray

    An Xarray extension to process coregistered Single Look Complex (SLC) image stacks acquired by Synthetic Aperture Radar (SAR).

    • Dask
    • InSAR
    • Interferometry
    • + 6
    • Python
    4
    1
    Cover image for scriptcwl

    scriptcwl

    Create CWL workflows by writing a simple Python script.

    • CWL
    • Workflow technologies
    • Python
    • Common Workflow Language
    8
    1
    Cover image for self-hosted runners

    self-hosted runners

    Collection of resources to set up GitHub runners on self-hosted infrastructure

    • High performance computing
    • Shell
    • Dockerfile
    5
    1
    Cover image for SimVascular

    SimVascular

    The only fully open source software package providing a complete pipeline from medical image data segmentation to patient specific blood flow simulation and analysis.

    • Cardiovascular
    • Fluid mechanics
    • Medical image computing
    • + 1
    • C++
    • Tcl
    • Makefile
    • + 9
    4
    1
    Cover image for sirup

    sirup

    Sirup is an open-source Python package that makes it easy to connect to, and rotate across, VPN servers provided by services such as ProtonVPN and Surfshark.

    • ip-rotation
    • openvpn
    • python
    • + 1
    • Python
    • Shell
    1
    1
    Cover image for SlicerIGT

    SlicerIGT

    Software toolkit for rapid development of image-guided therapy systems - for minimally invasive medical procedures, where operators rely on computer-generated images rather than direct sight of the target organs.

    • 3D Slicer
    • deep learning
    • Medical image computing
    • + 2
    • C++
    • Python
    • CMake
    2
    1