All software
ExploreASL
ExploreASL is a pipeline and toolbox for image processing and statistics of arterial spin labeling perfusion MR images. It is designed as a multi-OS, open-source, collaborative framework that facilitates cross-pollination between image processing method developers and clinical investigators.
- ASL
- Image processing
- MRI
- C
- MATLAB
- Python
FastMLC
Detect clusters in for example large collections of DNA or protein sequences, and visualize the results in a web browser.
- Big data
- Machine learning
- Visualization
- C
- C++
- CMake
- + 5
pdb2sql
Fast and versatile Python package that leverages SQL queries to parse, manipulate and process biomolecular structure files. The structure files should be in the PDB format and are available on www.rcsb.org.
- Big data
- Optimized data handling
- Makefile
- Python
- TeX
SIGA.py
Make genome annotations semantically interoperable
- Inter-operability & linked data
- Python
Code supporting the publication: BAN: detecting backdoors activated by adversarial neuron noise.
Code supporting the publication: BAN: detecting backdoors activated by adversarial neuron noise.
- Adversarial Noise
- Backdoor Defense
- Backdoor Trigger Inversion
- + 3
- JSON
- Jupyter Notebook
- Markdown
- + 3
stable-dmpc-pwa
Software underlying publication: Distributed model predictive control for piecewise affine systems based on switching ADMM
- Alternating direction method of multipliers (ADMM)
- distributed model predictive control (MPC)
- networked systems
- + 1
- Markdown
- Matlab
- Other
- + 1
MDStudio
A tool to run molecular dynamics workflows.
- High performance computing
- Real time data analysis
- Workflow technologies
- CSS
- Dockerfile
- HTML
- + 5
Code supporting the publication: Towards Backdoor Stealthiness in Model Parameter Space.
Code supporting the publication: Towards Backdoor Stealthiness in Model Parameter Space.
- backdoor attack
- computer vision
- Convolutional neural networks
- + 4
- Markdown
- Other
- Python
RoIPoly
Source code for “RoIPoly: Vectorized Building Outline Extraction Using Vertex and Logit Embeddings”
- aerial imagery
- building footprint extraction
- instance segmentation
- + 4
- C
- C++
- Markdown
- + 4
Lightning
Lightning: Fast data processing using GPUs on distributed platforms
- Big data
- GPU
- High performance computing
- C++
- Python
- Rust
WRFpy
WRFpy is a python application that provides an easy way to set up, run, and monitor Weather Research and Forecasting simulations
- Data Simulation
- python
- Python
AutoEncodersDLSCA
Code underlying the publication: Autoencoder-enabled model portability for reducing hyperparameter tuning efforts in side-channel analysis
- Autoencoders
- Hyperparameter Tuning
- Portability
- + 3
- Markdown
- Other
- Python