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Access integrated data on genes and associated traits in plants
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SIGA.py
Make genome annotations semantically interoperable
11
mentions
2
contributors
Cite this software
Description
- An easy-to-use command-line tool for bioinformaticians
- Transforms genome annotations in GFF files into RDF graphs using a config file
- Supports different GFF versions and RDF serializations (formats)
- Used in combination with RDF stores or Linked Data platforms
Keywords
License
Participating organisations
Reference papers
Mentions
- 1.Author(s): Sylvie Marhadour, Charlotte ProdhommePublished in Potato Production Worldwide by Elsevier in 2023, page: 273-30110.1016/b978-0-12-822925-5.00021-9
- 2.Author(s): Ciro Gianmaria Amoroso, Dilip R. Panthee, Giuseppe Andolfo, Felipe Palau Ramìrez, Maria Raffaella ErcolanoPublished in Genomic Designing for Biotic Stress Resistant Vegetable Crops by Springer International Publishing in 2022, page: 1-3510.1007/978-3-030-97785-6_1
- 1.Author(s): Senthil Kumar Narayanasamy, Kathiravan Srinivasan, Yuh-Chung Hu, Satish Kumar Masilamani, Kuo-Yi HuangPublished in Electronics by MDPI AG in 2022, page: 45310.3390/electronics11030453
- 2.Author(s): K. Joeri van der Velde, Gurnoor Singh, Rajaram Kaliyaperumal, XiaoFeng Liao, Sander de Ridder, Susanne Rebers, Hindrik H. D. Kerstens, Fernanda de Andrade, Jeroen van Reeuwijk, Fini E. De Gruyter, Saskia Hiltemann, Maarten Ligtvoet, Marjan M. Weiss, Hanneke W. M. van Deutekom, Anne M. L. Jansen, Andrew P. Stubbs, Lisenka E. L. M. Vissers, Jeroen F. J. Laros, Esther van Enckevort, Daphne Stemkens, Peter A. C. ‘t Hoen, Jeroen A. M. Beliën, Mariëlle E. van Gijn, Morris A. SwertzPublished in Scientific Data by Springer Science and Business Media LLC in 202210.1038/s41597-022-01265-x
Contributors
Contact person
Arnold Kuzniar
Netherlands eScience Center
Netherlands eScience Center
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