All software
Pycoeus
Pycoeus is a command-line tool and python package designed for exploration of multiband geospatial datasets. It lets the user iteratively train and retrain segmentation models in seconds. A combination of Deep learning and traditional machine learning is used, leveraging the best of both methods.
- deep learning
- gis
- Machine learning
- + 2
- Python
Pydicer
Eases conversion of Radiotherapy DICOM data to research-ready format (NIfTI). Provides analysis functionality.
- Imaging and Image Processing
- Makefile
- Python
- Shell
pydicom
Reads, modifies, and writes DICOM data in a "pythonic" way. General-purpose framework, does not handle specifics of individual SOP classes.
- Software Engineering and Data Infrastructure
- Makefile
- Python
- Shell
PyELSEPA
Python wrapper for ELSEPA, a numeric code for computing elastic scattering cross-sections for electrons and positrons off neutral atoms.
- Dockerfile
- Python
pyESAPI
A Python wrapper for the Varian Eclipse Scripting API (ESAPI). Allows scripting of Eclipse functions using Python.
- Software Engineering and Data Infrastructure
- PowerShell
- Python
Py-HLA-Match
Py-HLA-Match is a Python library for standardised, rule-based HLA (Human Leukocyte Antigen) matching in retrospective analyses, method development, benchmarking, and in silico studies in immunogenetics and related fields.
- antigen recognition domain
- ARD
- HLA
- + 10
- Python
Pylinac
Pylinac provides TG-142 quality assurance (QA) tools to Python programmers in the field of therapy and diagnostic medical physics.
- Imaging and Image Processing
- Python
- Shell
pymcc
Module that reads PTW mephisto mcc files from watertank scans or array files. pymcc relies on Pandas and uses a Pandas DataFrame to store the measurement values within the class objects.
- Treatment Planning and dosimetry
- Python
PyMedPhys
PyMedPhys is an open-source Medical Physics Python library built by an open community that values code sharing, review, improvement, and learning from each other.
- Quality Assurance
- Python
- TeX
pynetdicom
A Python library for DICOM network communication. Implements the DICOM network protocol to allow sending and receiving DICOM files.
- Software Engineering and Data Infrastructure
- Python
- Shell
pyOrthanc
PyOrthanc makes it easy to work with DICOM medical images stored on Orthanc servers using Python - instead of dealing with the DICOM protocol directly or creating complex code to interact with Orthanc's REST API.
- Software Engineering and Data Infrastructure
- Dockerfile
- Python
pyPENELOPEtools
pyPENELOPEtools is an open-source software to facilitate the use of the Monte Carlo code PENELOPE and its main programs such as PENEPMA
- Treatment Planning and dosimetry
- Python