All software
scikit-talk
Scikit-talk is an open-source toolkit for processing collections of real-world conversational speech in Python. The toolkit aims to facilitate the exploration of large collections of transcriptions and annotations of conversational interaction.
- conversation
- language corpora
- turn-taking
- (Python)
- (Shell)
seahtrue
Seahtrue processes XF analyzer data on oxygen consumption and acidification from Agilent Wave .xlsx exports into tidy, nested tibbles, enabling reproducible analysis, preprocessing checks, advanced visualisation, and statistics for open metabolic research.
- bioconductor
- metabolism
- R
- + 2
- (R)
Sentinel
Sentinel is an automated log-file analysis application for Varian linacs (TrueBeam, Halcyon, Edge).
- Quality Assurance
- (HTML)
GitHub action to set up apptainer
GitHub action for setting up apptainer in a Continous Integration job
- High performance computing
- (JavaScript)
- (Shell)
- (TypeScript)
SFINCS-BMI-server
grpc4bmi wrapper around Delteras/sfincs BMI for use with eWaterCycle
- (C++)
- (CMake)
- (Dockerfile)
- + 1
ShareTrait website
Share Trait web application is a web application that allows users to deposit trait data in the Share Trait database.
- Data
- Inter-operability & linked data
- metadata
SigmaCV
Auto-generates clean, customizable academic CVs from open research data (OpenAlex, ORCID, Crossref, DataCite, Open Editors Plus) — free for individuals, open-source, FAIR by design.
- academic CV
- bibliometrics
- CSL
- + 6
- (CSS)
- (Dockerfile)
- (JavaScript)
- + 4
SIRF
This software is the main output of SyneRBI, the Collaborative Computational Platform for Synergistic Reconstruction for Biomedical Imaging (formerly CCP PETMR).
- Imaging and Image Processing
- (C)
- (C++)
- (CMake)
- + 5
SkyCoords.jl
Astronomical coordinate systems in Julia
- astronomy
- Astrophysics
- Coordinate systems
- + 1
- (Julia)
SLURM CLI-API Proxy
SLURM CLI-API Proxy client is a tool designed to bridge existing applications and scripts that rely on the SLURM CLI. The tool mimics traditional SLURM CLI commands, translating them into REST API calls, enabling seamless integration of existing tools with external SLURM workload managers.
- Arvados
- Proxy
- SLURM
- (Go)
- (Python)
- (Shell)
slurm-mongo
A package to download slurm usage from a supercomputer and upload it to MongoDB
- Big data
- High performance computing
- SLURM
- (Python)
Slurm time on Jupyter
Display Slurm job remaining time in Jupyter top bar
- High performance computing
- jupyter notebooks
- SLURM
- (CSS)
- (JavaScript)
- (Python)
- + 1