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37-48 of 51

EXCITED Machine Learning Workflow

An open workflow for creating machine learning models for estimating the global biospheric CO2 exchange.

CO2
Data Analysis
geospatial
+ 4

Jupyter Notebook
Python

Experiment Launcher

Generate and launch Jupyter notebooks for your users.

Workflow technologies

Python
Makefile

fieldcompare

A Python package for regression testing simulation results. Compare field data supporting various structured formats such as CSV and VTK file formats, through Python API or the command-line interface.

Data Analysis
Numerical analysis
python
+ 1

Python

HERA_CAL_QUANTUM

Radioastronomy calibration pipeline of the HERA telescope ported on quantum computers

calibration
python
Quantum Computing
+ 1

Jupyter Notebook
Python
Shell

infra-stemmus-scope

Set-up and run STEMMUS-SCOPE on SURF research cloud (SRC)

Workflow technologies

JUBE

JUBE is a generic, lightweight, configurable environment to run, monitor and analyse application execution in a systematic way. This software is commonly used to execute benchmarks and complex workflows on High Performance Computers, but is not limited to these systems.

Benchmarking
High performance computing
HPC
+ 4

Python
Shell
C

NPLinker eScience Workshop GenMetMine Materials

These materials were used as a part of the NPLinker eScience Workshop on Natural Product Genome & Metabolome Mining: https://www.wur.nl/en/research-results/chair-groups/plant-sciences/bioinformatics/teaching/nplinker_workshop.htm Most materials are available in a format facilitating its reuse.

Data mining
genomics
Inter-operability & linked data
+ 4

One button compute

Web application for running a CWL workflow on a bunch of files.

Optimized data handling
Workflow technologies

Python
HTML
Common Workflow Language

oTree Demo Experiments

oTree demo experiment: Public goods game

behavioral research
oTree
Workflow technologies

HTML
Python
JavaScript
+ 1

ReaxPro framework ontology

This application ontology is dedicated to the ReaxPro framework for the multi-scale modeling of catalytic materials.

Multi-scale & multi model simulations
ontology
Workflow technologies

RESTful APE

RESTfull API for the APE (Automated Pipeline Explorer) library.

Java
Program synthesis
REST API
+ 1

Java
Dockerfile

Rosemary

Rosemary is a plugin for YASGUI (Yet Another SPARQL GUI), facilitating creation of SPARQL queries without requiring knowledge of SPARQL.

Data
database
Data management
+ 10

JavaScript
CSS
HTML
+ 1