Set up and run STEMMUS-SCOPE on SURF research cloud (SRC).

This is an instruction about how to set up SURF research cloud (SRC) for executing the notebook of the STEMMUS-SCOPE model using executable file.

For administrators

Access to SRC

To get access to SRC, you need to apply for the compute services via the request portal. When your application is approved, SURF will send you an invitation with the login to SRC.

Create workspace

For system administrators who want to create workspace on SURF research cloud for configuring the environment and running the STEMMUS-SCOPE model, please check this document.

Give users access to workspace

Administrators can invite users to access the created workspace on SRC via the SURF Research Access Management system. To access the SURF Research Access Management system, visit this site. The administrators can send invitations to new users following this documentation. Administrators should be invited with admin role.

For users

Access to SRC

For users trying to access the existing workspace, first ask administrators to invite you. After receiving the invitation link, you can follow this doc to create your account on SRC and access the workspace. To log in to the SRC, click here. To access your workspace, follow this instruction.

Setup environment

For users who want to configure the jupyter-workspace environment via conda and install pystemmusscope to execute the notebook, please check this document.