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Cover image for i-VRESSE jupyterlab haddock3 configurator

i-VRESSE jupyterlab haddock3 configurator

Jupter Lab extension to create/edit haddock3 configuration file.

  • Inter-operability & linked data
  • TypeScript
  • Python
  • JavaScript
  • + 1
1
0
Cover image for LinkAhead

LinkAhead

Open Source Research Data Management Software

  • Data
  • ETL
  • Inter-operability & linked data
  • + 4
  • Java
  • Shell
  • Python
  • + 2
6
6
Cover image for LitStudy

LitStudy

Explore scientific literature using Python from the comfort of a Jupyter notebook

  • Inter-operability & linked data
  • Text analysis & natural language processing
  • Visualization
  • Python
  • HTML
7
10
Cover image for lofar-ld

lofar-ld

Publish LOFAR catalog as Linked Data.

  • Inter-operability & linked data
  • Makefile
6
0
Cover image for MagnumPI - Potential Integrator

MagnumPI - Potential Integrator

A package for the calculation of scattering angles and cross sections.

  • Inter-operability & linked data
  • Visualization
  • C++
  • Mathematica
  • Python
  • + 2
6
5
Cover image for nanopub

nanopub

The nanopub library provides a high-level, user-friendly python interface for searching, publishing and retracting nanopublications.

  • Inter-operability & linked data
  • Python
  • Shell
  • Batchfile
3
3
Cover image for NanopubJL

NanopubJL

JupyterLab extension to aid in searching and publishing of Nanopublications in a python notebook

  • Inter-operability & linked data
  • TypeScript
  • Python
  • JavaScript
  • + 3
2
0
Cover image for NPLinker eScience Workshop GenMetMine Materials

NPLinker eScience Workshop GenMetMine Materials

These materials were used as a part of the NPLinker eScience Workshop on Natural Product Genome & Metabolome Mining: https://www.wur.nl/en/research-results/chair-groups/plant-sciences/bioinformatics/teaching/nplinker_workshop.htm Most materials are available in a format facilitating its reuse.

  • Data mining
  • genomics
  • Inter-operability & linked data
  • + 4
    0
    0
    Cover image for Paired omics data platform

    Paired omics data platform

    If you do metabolomics experiments with mass spectra and have sequenced the genomes of the samples, then the platform can help you link them.

    • Inter-operability & linked data
    • TypeScript
    • JavaScript
    • HTML
    • + 3
    2
    0
    Cover image for pbg-ld

    pbg-ld

    Access integrated data on genes and associated traits in plants

    • Data Analysis
    • genomics
    • Inter-operability & linked data
    • PLpgSQL
    • Shell
    • Python
    • + 2
    4
    9
    Cover image for QTLTableMiner++

    QTLTableMiner++

    Extract gene-trait associations from scientific literature

    • Inter-operability & linked data
    • Text analysis & natural language processing
    • Java
    • Shell
    3
    9
    Cover image for recipy

    recipy

    Effortless provenance tracking in Python

    • Inter-operability & linked data
    • Optimized data handling
    • Python
    • HTML
    • Jupyter Notebook
    • + 2
    2
    0