Egon Willighagen
Chemistry Development Kit
Open Source cheminformatics library.
- Cheminformatics
- Chemistry
- Computational Chemistry
- Java
- Pawn
- HTML
BridgeDb Java
Java library for identifier mapping
- Data
- persistent identifiers
- Java
- Perl
- Shell
- + 5
Scholia
Graphical User Interface around Wikidata that uses SPARQL to collect data
- Wikidata
- JavaScript
- Python
- HTML
- + 3
CMLXOM
Java library for working with Chemical Markup Language files.
- Chemical Markup Language
- Chemistry
- XML
- Java
- XSLT
- HTML
- + 1
citation.js
Citation.js converts formats like BibTeX, Wikidata JSON and BibJSON to CSL-JSON to convert to other formats like APA, Vancouver, RIS and back to BibTeX.
- Bibliography
- BibTeX
- Data Citation
- + 2
- JavaScript
- TeX
- Roff
Bacting
Bacting is an open-source platform for chemo- and bioinformatics based on Bioclipse that defines a number of common domain objects and wraps common functionality, providing a toolkit independent, scriptable solution to handle data from the life sciences.
- bioinformatics
- Cheminformatics
- Java
- TeX
rWikiPathways
Use this package to interface with the WikiPathways API. It provides programmatic access to WikiPathways content in multiple data and image formats, including official monthly release files and convenient GMT read/write functions.
- bioinformatics
- WikiPathways
- HTML
- R
- TeX
PathVisio
PathVisio is a free open-source software to curate biological pathway models.
- bioinformatics
- PathVisio
- Systems Biology
- + 2
- Java
- HTML
- JavaScript
- + 4
ISAAC Chrome extension
Chrome Web Extension for support of the NWO ISAAC platform. This extension is not endorsed or developed by the NWO.
- BibTeX
- CITATION.cff
- DataCite
- + 1
- JavaScript
- HTML
- CSS
- + 1
BridgeDb Webservice
REST API for identifier mapping
- persistent identifiers
- REST API
- webservice
- Java
- HTML
- JavaScript
- + 1
pybacting
Python wrapper around Bacting.
- Biology
- Chemistry
- python
- Python