Natural Sciences & Engineering
HyperCanny
Finds edges in high-dimensional data using the Canny algorithm.
- Data Analysis
- edge detection
- High performance computing
- C++
- C
- Python
- + 3
IncompressibleNavierStokes
This package implements energy-conserving solvers for the incompressible Navier-Stokes equations on a staggered Cartesian grid. It is based on the Matlab package INS2D/INS3D. The simulations can be run on the single/multithreaded CPUs or Nvidia GPUs.
- HPC
- Scientific machine learning
- Julia
iScore
A framework and predictor based on support vector machine and random walk graph kernel for scoring protein-protein interfaces.
- Big data
- Machine learning
- Protein-Protein Interaction
- Python
- Cuda
- Makefile
- + 1
KNIME node archetype
Want to write your own KNIME node Then use the KNIME node archetype to generate a node skeleton repository with sample code.
- Workflow technologies
- Java
KLIFS KNIME nodes
If you are working in the KNIME worflow platform and need data about your favorite kinase receptor ligand interaction, then these nodes are for you.
- Workflow technologies
- Java
- Shell
- Scala
KNIME node for Kripo
A node for the KNIME workflow systems that allows you to compare different binding sites in proteins with each other.
- Workflow technologies
- Java
KNIME molecule viewer nodes
A 3D viewer for large molecules for the KNIME workflow system.
- Visualization
- Workflow technologies
- Java
- JavaScript
- CSS
KNIME ss-TEA node
A node for the KNIME workflow systems that allows you to identify which residue position in a big protein sequence alignment is specific to ligand binding.
- Workflow technologies
- Java
KNIME Testflow
Allows you to test KNIME nodes automatically using JUnit.
- Workflow technologies
- Java
lofar-ld
Publish LOFAR catalog as Linked Data.
- Inter-operability & linked data
- Makefile
MDStudio
A tool to run molecular dynamics workflows.
- High performance computing
- Real time data analysis
- Workflow technologies
- Python
- CSS
- TypeScript
- + 5
MUSCLE3
MUSCLE3 is a coupling library for building multiscale simulations out of single-scale models.
- High performance computing
- Multi-scale & multi model simulations
- Fortran
- C++
- Python
- + 4