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Natural Sciences & Engineering

Natural Sciences & Engineering

Software (65)Projects (95)Releases (477)
25-36 of 65

HyperCanny

Finds edges in high-dimensional data using the Canny algorithm.

  • Data Analysis
  • edge detection
  • High performance computing
  • (C)
  • (C++)
  • (Makefile)
  • + 3
1
34

IncompressibleNavierStokes

This package implements energy-conserving solvers for the incompressible Navier-Stokes equations on a staggered Cartesian grid. It is based on the Matlab package INS2D/INS3D. The simulations can be run on the single/multithreaded CPUs or Nvidia GPUs.

  • HPC
  • Scientific machine learning
  • (Julia)
5
17

iScore

A framework and predictor based on support vector machine and random walk graph kernel for scoring protein-protein interfaces.

  • Big data
  • Machine learning
  • Protein-Protein Interaction
  • (C++)
  • (Cuda)
  • (Makefile)
  • + 1
4
88

KNIME node archetype

Want to write your own KNIME node Then use the KNIME node archetype to generate a node skeleton repository with sample code.

  • Workflow technologies
  • (Java)
1
40

KLIFS KNIME nodes

If you are working in the KNIME worflow platform and need data about your favorite kinase receptor ligand interaction, then these nodes are for you.

  • Workflow technologies
  • (Java)
  • (Scala)
  • (Shell)
2
42

KNIME node for Kripo

A node for the KNIME workflow systems that allows you to compare different binding sites in proteins with each other.

  • Workflow technologies
  • (Java)
1
40

KNIME molecule viewer nodes

A 3D viewer for large molecules for the KNIME workflow system.

  • Visualization
  • Workflow technologies
  • (CSS)
  • (Java)
  • (JavaScript)
2
39

KNIME ss-TEA node

A node for the KNIME workflow systems that allows you to identify which residue position in a big protein sequence alignment is specific to ligand binding.

  • Workflow technologies
  • (Java)
1
39

KNIME Testflow

Allows you to test KNIME nodes automatically using JUnit.

  • Workflow technologies
  • (Java)
1
40

lofar-ld

Publish LOFAR catalog as Linked Data.

  • Inter-operability & linked data
  • (Makefile)
6
0

MDStudio

A tool to run molecular dynamics workflows.

  • High performance computing
  • Real time data analysis
  • Workflow technologies
  • (CSS)
  • (Dockerfile)
  • (HTML)
  • + 5
4
10

MUSCLE3

MUSCLE3 is a coupling library for building multiscale simulations out of single-scale models.

  • High performance computing
  • Multi-scale & multi model simulations
  • (C)
  • (C++)
  • (Dockerfile)
  • + 4
4
26