Software Highlights

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1-12 of 49

Paired omics data platform

If you do metabolomics experiments with mass spectra and have sequenced the genomes of the samples, then the platform can help you link them.

  • Inter-operability & linked data
  • TypeScript
  • JavaScript
  • HTML
  • + 3
2
112
Logo for Code and data underlying the publication: City3D: Large-scale Building Reconstruction from Airborne LiDAR Point Clouds

Code and data underlying the publication: City3D: Large-scale Building Reconstruction from Airborne LiDAR Point Clouds

Code and data underlying the publication: City3D: Large-scale Building Reconstruction from Airborne LiDAR Point Clouds

  • Building
  • Point Cloud
  • Surface-reconstruction
  • + 1
  • C
  • C++
  • Other
  • + 8
4
77
Logo for Vantage6

Vantage6

An open-source platform for supporting the development of federated learning projects

  • federated learning
  • healthcare
  • privacy preserving analysis
  • + 1
  • Python
  • TypeScript
  • HTML
  • + 6
11
55
Logo for Research Software Directory

Research Software Directory

A content management system for research software, which promotes the visibility, reuse, and impact of research software.

  • FAIR
  • Research Software Impact
  • Software Citation
  • TypeScript
  • Java
  • PLpgSQL
  • + 8
26
39
Logo for MDStudio

MDStudio

A tool to run molecular dynamics workflows.

  • High performance computing
  • Real time data analysis
  • Workflow technologies
  • Python
  • CSS
  • TypeScript
  • + 5
4
10
Logo for cffinit

cffinit

A web form to initialize CITATION.cff files which you can use to include citation information into your software repository.

  • Software Citation
  • TypeScript
  • Vue
  • JavaScript
  • + 3
7
4

evidence

doc2vec-based assisted close reading with support for abstract concept-based search and context-based search

  • Text analysis & natural language processing
  • TypeScript
  • Go
  • Jupyter Notebook
  • + 5
9
4

PanVA

Variant Analysis within Pangenomes.

  • API
  • Data Analysis
  • pangenomics
  • Vue
  • TypeScript
  • Python
  • + 6
2
4

NEBULA

The NEBULA (Nuxt & eScience Based Universal Learning Application) framework can be used to create an easily maintainable, version-controllable, web-based lesson collection. It uses Nuxt.js and Vue.js.

  • teaching
  • web
  • Vue
  • TypeScript
  • SCSS
  • + 1
3
3

tortellini

GitHub action to check whether any licensing issues exist for given software.

  • TypeScript
  • JavaScript
4
2
Logo for FAIRSECO

FAIRSECO

FAIRSECO provides a way to quickly analyse a variety of data and metrics of your software, and it allows you to explore the impact of your software on the academic world. Metadata is gathered from many different sources, which is then analysed and compiled into a clear overview.

  • Data Analysis
  • FAIR
  • Inter-operability & linked data
  • + 2
  • TypeScript
  • EJS
  • JavaScript
3
1
Logo for IRIDA

IRIDA

Integrated Rapid Infectious Disease Analysis (IRIDA) platform is a user-friendly, distributed, open source bioinformatics and analytical web platform that was developed to support real-time infectious disease outbreak investigations using whole genome sequencing data.

  • genomics
  • infectious disease
  • Java
  • JavaScript
  • TypeScript
  • + 6
3
1