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Software Highlights

ESMValTool

The Earth System Model eValuation Tool is a community diagnostics and performance metrics tool for the evaluation of Earth System Models that allows for routine comparison of models and observations.

Big data
Optimized data handling
Visualization
+ 1

NCL
Python
R
+ 7

386

Kernel Tuner

Kernel Tuner greatly simplifies the development of highly-optimized and auto-tuned CUDA, OpenCL, and C code, supporting many advanced use-cases and optimization strategies that speed up the auto-tuning process.

Big data
GPU
High performance computing
+ 3

Python

116

Citation File Format

The Citation File Format lets you provide citation metadata for software or datasets in plaintext files that are easy to read by both humans and machines.

FAIR
Inter-operability & linked data

Python

Research Software Directory

A content management system for research software, which promotes the visibility, reuse, and impact of research software.

FAIR
Research Software Impact
Software Citation

TypeScript
Java
PLpgSQL
+ 7

DeepRank2

DeepRank2 is an open-source deep learning framework for data mining of protein-protein interfaces or single-residue missense variants. This package is an improved and unified version of three previously developed packages: DeepRank, DeepRank-GNN and DeepRank-Mut.

Cancer vaccine
Convolutional Neural Network
Deep Learning Framework
+ 5

Python
Jupyter Notebook
TeX
+ 1

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1-9 of 9

ESMValTool

The Earth System Model eValuation Tool is a community diagnostics and performance metrics tool for the evaluation of Earth System Models that allows for routine comparison of models and observations.

Big data
Optimized data handling
Visualization
+ 1

NCL
Python
R
+ 7

386

ESMValCore

ESMValTool Core: core functionalities and driver for ESMValTool, a community diagnostic and performance metrics tool for routine evaluation of Earth System Models in CMIP.

Big data
Optimized data handling
Visualization
+ 1

Python
Jupyter Notebook
HTML
+ 5

126

Vantage6

An open-source platform for supporting the development of federated learning projects

federated learning
healthcare
privacy preserving analysis
+ 1

Python
TypeScript
HTML
+ 6

Netherlands eScience Center Python Template

Generic template for Python packages, so you can spend less time setting up and configuring, and comply with the Netherlands eScience Center Software Development Guide from the start.

software development tools
software sustainability
template

Jinja
Python
Shell

Turing Data Safe Haven

Data Safe Haven is an open-source framework for creating Trusted Research Environments (TREs) to analyse sensitive data. It provides a set of scripts that will allow you to deploy, administer and use your own TRE on Microsoft Azure cloud.

Cloud
cloud storage
Infrastructure as code
+ 3

Python
Shell
Jinja
+ 3

Entangled

Entangled makes literate programming easier. It keeps markdown and program source in sync. This makes it more convenient to extend and debug your literate code.

Literate Programming
open science
python
+ 2

Python
C++
Makefile
+ 2

Ricgraph - Research in context graph

With Ricgraph (Research in context graph), you can create a graph from research information that is stored in various source systems. You can explore this graph and discover relations you were not aware of.

graph
graph database
research in context graph
+ 2

Python
Makefile
JavaScript
+ 5

eWatercycle SURF Research Cloud

Codified instructions for deploying the eWaterCycle platform on the SURF Research Cloud.

Jinja
Python
Shell

Yoda

A system for reliable, long-term storing and archiving large amounts of research data during all stages of a study.

HTML
Jinja
Python
+ 4