All software
Plastimatch
Focuses on high-performance volumetric registration, segmentation, and image processing of volumetric medical images. Supports DICOM and DICOM-RT import/export.
- Imaging and Image Processing
- (C)
- (C++)
- (CMake)
- + 2
Platalea
Platalea contains deep neural network architectures for modeling spoken language from multiple sources at once: audio, and simultaneously images, text or video. This can be used to learn about what different context sources add to the language acquisition process.
- (Python)
PlatiPy
Aims to simplify use, visualization, processing, and analysis of medical images. Built on SimpleITK, VTK.
- Imaging and Image Processing
- (CSS)
- (Dockerfile)
- (HTML)
- + 4
PortPy
PortPy, short for Planning and Optimization for Radiation Therapy, is an initiative aimed at creating an open-source Python library for cancer radiotherapy treatment planning optimization.
- Treatment Planning and dosimetry
- (CSS)
- (Python)
prfmodel
A modern Python implementation for population receptive field modelling.
- GPU
- Neuroscience
- optimization
- + 2
- (Python)
PRIMO
Simulates clinical linear accelerators and estimates absorbed dose distributions. Combines GUI with PENELOPE and DPM Monte Carlo codes.
- Treatment Planning and dosimetry
protein-detective
Python package to detect proteins in EM density maps.
- (Python)
PSRDADA python
If you want to do astrophysics in python, this could come in handy. Connect to a radiotelescope and process data in real-time.
- (Cython)
- (Makefile)
- (Python)
pyanno4RT
pyanno4rt is a Python package for conventional and outcome prediction model-based inverse photon and proton treatment plan optimization, including radiobiological and machine learning (ML) models for tumor control probability (TCP) and normal tissue complication probability (NTCP).
- Treatment Planning and dosimetry
- (Python)
pybacting
Python wrapper around Bacting.
- Biology
- Chemistry
- python
- (Just)
- (Python)
PyBeam-QA
A Python library for performing beam quality assurance tests in radiotherapy. The software is in an early stage of development.
- Quality Assurance
- (HTML)
- (JavaScript)
- (Python)
- + 1
pyCERR
pyCERR provides convenient data structure for imaging metadata and their associations. Utilities are provided to to extract, transform, organize metadata and visualize results of image processing for image and dosimetry features, image processing for AI model training and inference.
- Treatment Planning and dosimetry
- (Python)