All software
fairtally
Create comprehensive reports on compliance with the fair-software.nl recommendations.
- Dockerfile
- Python
- Shell
fairworkflows
A python library for constructing, annotating and publishing scientific workflows described using semantic technologies.
- Common Workflow Language
- HTML
- Python
- + 1
frbcatdb
A database to store a catalog of Fast Radio Bursts and expose them as Virtual Observation Events.
- Optimized data handling
- Python
- Shell
MOTrainer
Measurement Operator Trainer for data assimilation purposes.
- Data assimilation
- High performance computing
- Machine learning
- + 2
- Jupyter Notebook
- Python
- Shell
- + 1
NEWSGAC platform
Software for running the online platform of the NEWSGAC project for running explainable machine learning models on textual data
- Explainable AI
- Machine learning
- Text analysis & natural language processing
- CSS
- Dockerfile
- HTML
- + 4
ochre
A tool to clean up text generated by OCR using individual words as well as their context.
- Machine learning
- Text analysis & natural language processing
- Common Workflow Language
- HTML
- Jupyter Notebook
- + 2
PathVisio
PathVisio is a free open-source software to curate biological pathway models.
- bioinformatics
- PathVisio
- Systems Biology
- + 2
- Batchfile
- CSS
- HTML
- + 4
Ricgraph - Research in context graph
With Ricgraph (Research in context graph), you can create a graph from research information that is stored in various source systems. You can explore this graph and discover relations you were not aware of.
- graph
- graph database
- research in context graph
- + 2
- CSS
- Dockerfile
- HTML
- + 5
sfb-annotator
Annotate field books of natural history collections
- Inter-operability & linked data
- CSS
- Dockerfile
- Java
- + 4
ShiCo
A visualization that shows how the meaning we attach to a given concept shifts over time.
- Text analysis & natural language processing
- Visualization
- CSS
- Dockerfile
- HTML
- + 3
swiftmhc
SwiftMHC is a deep learning algorithm for predicting pMHC structure and binding affinity at the same time.
- deep learning
- Protein-Protein Interaction
- Transformer
- Jupyter Notebook
- Mask
- Python
- + 1
ghc
GHC with stream fusion, used as benchmark in the publication: Higher Order Patterns for Rewrite Rules
- compiler
- fusion
- higher order matching
- + 2
- Automake
- C
- C++
- + 16