All software
KNIME GPCRdb nodes
A node for the KNIME workflow systems that allows you to retrieve data about your favorite G protein-coupled receptors from gpcrdb.org.
- Workflow technologies
- (Java)
KNIME node for Kripo
A node for the KNIME workflow systems that allows you to compare different binding sites in proteins with each other.
- Workflow technologies
- (Java)
KNIME Testflow
Allows you to test KNIME nodes automatically using JUnit.
- Workflow technologies
- (Java)
LitStudy
Explore scientific literature using Python from the comfort of a Jupyter notebook
- Inter-operability & linked data
- Text analysis & natural language processing
- Visualization
- (HTML)
- (Python)
KNIME Pharmacophore
A plugin for the KNIME workflow system that adds a Pharmacophore data type and nodes to read, write, and align them.
- Workflow technologies
- (Java)
KNIME PLANTS
A node for the KNIME workflow system that allows you to use the PLANTS protein-ligand docking algorithm.
- Workflow technologies
- (Java)
- (Mustache)
KNIME Python node archetype
Want to write your own KNIME node wrapping a Python library. Then use the KNIME Python node archetype to generate a node skeleton repository with sample code
- Big data
- Workflow technologies
- (Java)
- (Python)
KNIME Python wrapper
If you are developing a KNIME node which calls some Python code, then the KNIME Python wrapper can help you.
- Workflow technologies
- (Java)
- (Python)
BlueObelisk Euclid
A library of numeric, geometric and XML routines
- (HTML)
- (Java)
CMLXOM
Java library for working with Chemical Markup Language files.
- Chemical Markup Language
- Chemistry
- XML
- (Batchfile)
- (HTML)
- (Java)
- + 1
KNIME molecule viewer nodes
A 3D viewer for large molecules for the KNIME workflow system.
- Visualization
- Workflow technologies
- (CSS)
- (Java)
- (JavaScript)
KNIME ss-TEA node
A node for the KNIME workflow systems that allows you to identify which residue position in a big protein sequence alignment is specific to ligand binding.
- Workflow technologies
- (Java)