All software
Axiom-0
Dependency-free Python reference implementation for explicit data contracts, canonicalization, measurable state transitions, KL-divergence checks, validation, and reproducible repository boundaries
- canonical json
- data contracts
- Reproducibility
- + 3
- CSS
- HTML
- JavaScript
- + 3
haddock3-webapp
Web app to build haddock3 configuration and run it.
- CSS
- Dockerfile
- JavaScript
- + 2
i-VRESSE bartender
Bartender is a middleware web service to schedule jobs on various infrastructures.
- Workflow technologies
- Dockerfile
- Mako
- Python
BeamSchemeV1
Assists in extracting 1D profiles from 2D datasets. Calculates over 90 different parameters.
- Treatment Planning and dosimetry
- CSS
- JavaScript
- Pascal
BGC Viewer
A viewer for biosynthetic gene cluster data.
- bioinformatics
- Gene Clusters
- natural products
- + 1
- CSS
- Dockerfile
- HTML
- + 6
bibr
bibliography rodent 🦫 - a modern scientific extraction pipeline.
- Jinja
- Jupyter Notebook
- Python
- + 2
BIOMERO
a scalable and extensible image analysis framework
- biaflows
- bioimaging
- biomero
- + 9
- Dockerfile
- Python
- Shell
bird-cloud-gnn
bird-cloud-gnn is a Python package that helps generate a graph representation from point cloud data and fits graph neural networks for classification problem
- Classification
- Graph Neural Network
- Machine learning
- + 2
- Python
Bistromath
BistroMath is designed as add-on to the measuring software of water phantom systems used in radiotherapy.
- Treatment Planning and dosimetry
boatswain
Boatswain is a simple build system for docker images. It is especially useful when you have multiple docker images that depend on each other.
- containers
- docker
- Dockerfile
- Python
Brei
a minimalist workflow system in Python
- python
- Workflow technologies
- Nix
- Python
BridgeDbR
R package for the BridgeDb Java library making identifier mapping functionality available in the R environment.
- persistent identifiers
- Statistics
- HTML
- R
- TeX