All software
ARISE biocloud
The Biocloud is the underlying digital back-end infrastructure of the ARISE program.
- (Dockerfile)
- ("Jupyter Notebook")
- (Python)
- + 1
Arpra
Arpra is a C library for analyzing the propagation of numerical error in arbitrary precision IEEE-754 floating-point computations.
- Affine Arithmetic
- Arbitrary Precision
- Interval Arithmetic
- + 2
- (C)
- (M4)
- (Makefile)
asreview-simulation
Command line interface to simulate an ASReview analysis using a variety of prior sampling strategies, classifiers, feature extractors, queriers, balancers, and stopping rules, all of which can be configured to run with custom parameterizations.
- AI
- ASReview
- Automated Systematic Review
- + 4
- (Python)
asrlitcompare
A tool written in rmarkdown for assessing the level of agreement between two raters following screening in ASReview. Users only need the two .csv files downloaded from ASReview, and the tool will automatically compile a summary report as an HTML file, viewable in your web browser.
- ASReview
- inter-rater reliability
- literature screening
- + 1
- (AppleScript)
- (Awk)
- (Batchfile)
- + 14
AstroImages.jl
Visualization of astronomical images in Julia
- astronomy
- Astrophysics
- Julia Package
- + 1
- (Julia)
AstroLib.jl
Bundle of small astronomical and astrophysical routines.
- astronomy
- Astrophysics
- Julia Package
- (Julia)
Atlascine
Atlascine is an open-source, online mapping platform dedicated to bringing stories and maps closer together. This tool combines multimedia storytelling with digital mapping technologies to enable researchers to create, interact with and study spatial relationships within and between stories.
- atlas
- geovisualization
- Mapping stories
- + 3
- (CSS)
- (HTML)
- (JavaScript)
AttentionLayer.jl
Implements the Attention mechanism in Julia as a modular Lux layer
- Julia Package
- Machine learning
- Scientific machine learning
- (Julia)
haddock3-webapp
Web app to build haddock3 configuration and run it.
- (CSS)
- (Dockerfile)
- (JavaScript)
- + 2
i-VRESSE bartender
Bartender is a middleware web service to schedule jobs on various infrastructures.
- Workflow technologies
- (Dockerfile)
- (Mako)
- (Python)
BGC Viewer
A viewer for biosynthetic gene cluster data.
- bioinformatics
- Gene Clusters
- natural products
- + 1
- (CSS)
- (Dockerfile)
- (HTML)
- + 5
BIOMERO
a scalable and extensible image analysis framework
- biaflows
- bioimaging
- biomero
- + 9
- (Dockerfile)
- (Python)
- (Shell)