All software
PIQMIe
A web tool for mass spectrometry-based proteomics data analyses
- Data Analysis
- mass spectrometry
- Optimized data handling
- + 2
- Dockerfile
- HTML
- JavaScript
- + 3
endogenous-macrodynamics-in-algorithmic-recourse
Software and data underlying the publication: Endogenous Macrodynamics in Algorithmic Recourse
- Algorithmic Recourse
- Counterfactual Explanations
- Dynamic Systems
- + 1
- CSS
- HTML
- JavaScript
- + 8
cffconvert
Command line tool to convert CITATION.cff files to various formats used by reference managers such as Zotero and JabRef.
- Dockerfile
- HTML
- Python
- + 1
cffinit
A web form to initialize CITATION.cff files which you can use to include citation information into your software repository.
- Software Citation
- CSS
- HTML
- JavaScript
- + 3
evidence
doc2vec-based assisted close reading with support for abstract concept-based search and context-based search
- Text analysis & natural language processing
- CSS
- Dockerfile
- Go
- + 5
howfairis
Command line tool to analyze a git repository's compliance with the fair-software.eu recommendations.
- Dockerfile
- HTML
- Python
- + 1
Noodles
Task-based parallel programming model in Python that offers the same intuitive interface when running complex workflows on your laptop or on large computer clusters.
- High performance computing
- Workflow technologies
- HTML
- Jupyter Notebook
- Lua
- + 2
PETsChallenge
Code underlying: Privacy-Preserving Membership Queries for Federated Anomaly Detection
- Anomaly detection
- cryptography
- elliptic curves
- + 4
- HTML
- Markdown
- Other
- + 4
Beyond the book
Measure the number of contributions to Wikipedia entries from individuals from different counties as a measure of cultural bias.
- Text analysis & natural language processing
- CSS
- HTML
- JavaScript
- + 2
iReceptor Gateway
A Distributed Data Management System and Scientific Gateway for Mining Next Generation Sequence Data from Immune Responses.
- immunogenomics
- Immunology
- iReceptor
- Blade
- Dockerfile
- HTML
- + 7
PyChelator
PyChelator is a Python-based Colab and web application for metal chelator calculations, taking into account pH, temperature, and ionic strength. The build-in constants can be used for EGTA and ATP as chelators, together with Calcium and Magnesium as metals. User-defined constants can be used.
- application
- calcium
- chelator
- + 7
- CSS
- HTML
- JavaScript
- + 2
Revisited Via Appia
Create visual storylines that involve media like images and videos embedded in a 3D environment with efficient Pointcloud data directly from the web browser.
- cultural heritage
- Digital Twins
- gis
- + 2
- CSS
- HTML
- JavaScript
- + 3