All software
PanVA
Variant Analysis within Pangenomes.
- API
- Data Analysis
- pangenomics
- Vue
- TypeScript
- Python
- + 6
PathVisio
PathVisio is a free open-source software to curate biological pathway models.
- bioinformatics
- PathVisio
- Systems Biology
- + 2
- Java
- HTML
- JavaScript
- + 4
Ricgraph - Research in context graph
With Ricgraph (Research in context graph), you can create a graph from research information that is stored in various source systems. You can explore this graph and discover relations you were not aware of.
- graph
- graph database
- research in context graph
- + 2
- Python
- Makefile
- Shell
- + 5
ShiCo
A visualization that shows how the meaning we attach to a given concept shifts over time.
- Text analysis & natural language processing
- Visualization
- Python
- JavaScript
- HTML
- + 3
longterm_datasets
Code underlying the publication: "Are current long-term video understanding datasets long-term?"
- computer vision
- deep learning
- Long-term action recognition
- HTML
- Python
- Other
- + 2
BrainBrowser
BrainBrowser is an open source JavaScript library exposing a set of web-based 3D visualization tools primarily targetting neuroimaging
- 3D
- brainbrowser
- neurology
- + 2
- JavaScript
- Python
- CSS
- + 1
CBRAIN
CBRAIN is a flexible Ruby on Rails framework for accessing and processing of large data on high-performance computing infrastructures.
- CBRAIN
- cluster
- Data Analysis
- + 6
- Ruby
- HTML
- JavaScript
- + 3
Geodisy
Geodisy is a research data discovery tool that harvests information from existing research data repositories and displays applicable records onto a map-based search interface.
- geospatial
- metadata
- research data
- Java
- Ruby
- XSLT
- + 6
IRIDA
Integrated Rapid Infectious Disease Analysis (IRIDA) platform is a user-friendly, distributed, open source bioinformatics and analytical web platform that was developed to support real-time infectious disease outbreak investigations using whole genome sequencing data.
- genomics
- infectious disease
- Java
- JavaScript
- TypeScript
- + 6
ISAAC Chrome extension
Chrome Web Extension for support of the NWO ISAAC platform. This extension is not endorsed or developed by the NWO.
- BibTeX
- CITATION.cff
- DataCite
- + 1
- JavaScript
- HTML
- CSS
- + 1
i-VRESSE workflow-builder
Need to write a complex config file then the i-VRESSE workflow builder might be the tool for you.
- Workflow technologies
- TypeScript
- Python
- CSS
- + 3
LORIS
Longitudinal Online Research and Imaging System (LORIS) is a web-based data and project management software for neuroimaging research studies. It is an OPEN SOURCE framework for storing and processing behavioural, clinical, neuroimaging and genetic data.
- Computational Neuroscience
- database
- neuroimaging
- + 3
- PHP
- JavaScript
- TypeScript
- + 9