All software
AMIGOpy
Welcome to AMIGOpy (A Medical Image-based Graphical platfOrm - Python)! This is an evolution of the previously developed MATLAB-based software AMIGOBrachy.
- Treatment Planning and dosimetry
- C++
- CSS
- Inno Setup
- + 2
MPI-AMRVAC
MPI-AMRVAC is a parallel adaptive mesh refinement framework aimed at solving (primarily hyperbolic) partial differential equations by a number of different numerical schemes. The emphasis is on (near) conservation laws and on shock-dominated problems in particular.
- Fortran
- FPP
- Jupyter Notebook
- + 4
Anatomy Matters
Reproducible analysis code for anatomical tumor–immune archetypes in diffuse large B-cell lymphoma.
- computational pathology
- diffuse large B-cell lymphoma
- jupyter notebooks
- + 4
- Jupyter Notebook
- PowerShell
- Python
- + 1
ANNUBeS
ANNUBeS is a deep learning framework meant to generate synthetic data and train on them neural networks aimed at developing and evaluating animals' training protocols in neuroscience.
- neural networks
- Neuroscience
- Python
Annular
Annular is a setup for running coupled energy system models with the aim of modeling flexibility scheduling and the policy regulations that affect the behavior of flexibility providers.
- Julia
- Jupyter Notebook
- Python
ApertureComplexity
Contains complete functionality of aperture complexity analysis. Extends methodology to any TPS exporting DICOM-RP.
- Treatment Planning and dosimetry
- Python
Arctic Web Map
Arctic Web Map (AWM) is an Arctic-specific web mapping tool allowing researchers to customize map projections for scientifically accurate visualization and analysis, a function that is critical for arctic research but missing in existing web mapping platforms.
- data collection
- python
- wildlife
- CSS
- JavaScript
- Python
- + 1
ARISE biocloud
The Biocloud is the underlying digital back-end infrastructure of the ARISE program.
- Go Template
- HCL
- Jinja
- + 2
asreview-simulation
Command line interface to simulate an ASReview analysis using a variety of prior sampling strategies, classifiers, feature extractors, queriers, balancers, and stopping rules, all of which can be configured to run with custom parameterizations.
- AI
- ASReview
- Automated Systematic Review
- + 4
- Python
haddock3-webapp
Web app to build haddock3 configuration and run it.
- CSS
- Dockerfile
- JavaScript
- + 2
i-VRESSE bartender
Bartender is a middleware web service to schedule jobs on various infrastructures.
- Workflow technologies
- Dockerfile
- Mako
- Python
BGC Viewer
A viewer for biosynthetic gene cluster data.
- bioinformatics
- Gene Clusters
- natural products
- + 1
- CSS
- Dockerfile
- HTML
- + 6